RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MMP15P51511 669 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF84P51523 738 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF133P52736 654 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-202ENST00000374426 SELPLGQ14242 412 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 MOGQ16653 247 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 CYP51A1Q16850 503 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 FAM209AQ5JX71 171 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 SPATA46Q5T0L3 261 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 HIST3H2AQ7L7L0 130 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 NANOGNBQ7Z5D8 188 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 BPIFB2Q8N4F0 458 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 SYT14Q8NB59 555 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 CCL17Q92583 94 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 RAB1CQ92928 201 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 DVL3Q92997 716 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-202ENST00000374426 HIST1H2ACQ93077 130 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 ELMOD3Q96FG2 381 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 MPP4Q96JB8 637 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 GAL3ST1Q99999 423 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 PRSS27Q9BQR3 290 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 CCDC28BQ9BUN5 200 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 PCDHAC1Q9H158 963 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 C7orf69Q9H7B7 122 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 SPRY3O43610 288 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 TRMUO75648 421 aaKnown RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 UBOX5O94941 541 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 PRSS23O95084 383 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 CCNOP22674 350 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 STOMP27105 288 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 CDAP32320 146 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 ATP4BP51164 291 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 UGT2B15P54855 530 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 MTPNP58546 118 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 UBA52P62987 128 aaKnown RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 LCN2P80188 198 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 MRPS34P82930 218 aaKnown RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 HSF2Q03933 536 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 RPL18Q07020 188 aaKnown RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 THEM4Q5T1C6 240 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 C10orf128Q5T292 105 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF771Q7L3S4 317 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 IPCEF1Q8WWN9 437 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 ASB10Q8WXI3 467 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 NABP1Q96AH0 204 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 TAMM41Q96BW9 452 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 MARS2Q96GW9 593 aaKnown RBP11.69□□□□□ -0.54
CXCL12-202ENST00000374426 POM121L2Q96KW2 1035 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 SIAEQ9HAT2 523 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 TMBIM4Q9HC24 238 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 UGT2A1Q9Y4X1 527 aa11.69□□□□□ -0.54
CXCL12-202ENST00000374426 LOC100509620A0A075B734 347 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 IGKV1D-43A0A0B4J1Z2 117 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 A0A1W2PRG6 482 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 ZSCAN5BA6NJL1 495 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 CENPBD1B2RD01 187 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 MCIDASD6RGH6 385 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 MGRN1O60291 552 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 SLC2A10O95528 541 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 ACADSP16219 412 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF32P17041 273 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 CRYBA2P53672 197 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
CXCL12-202ENST00000374426 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF718Q3SXZ3 478 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 PRR31Q5SQ13 230 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 ARMC4Q5T2S8 1044 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 DHDDSQ86SQ9 333 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
CXCL12-202ENST00000374426 RETREG3Q86VR2 466 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 DPP10Q8N608 796 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
CXCL12-202ENST00000374426 NMD3Q96D46 503 aaKnown RBP11.68□□□□□ -0.54
CXCL12-202ENST00000374426 CGREF1Q99674 301 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
CXCL12-202ENST00000374426 LEF1Q9UJU2 399 aaPredicted RBP11.68□□□□□ -0.54
CXCL12-202ENST00000374426 PPIAL4AQ9Y536 164 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 PCDHGB1Q9Y5G3 927 aa11.68□□□□□ -0.54
CXCL12-202ENST00000374426 PLSCR5A0PG75 271 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 ISPDA4D126 451 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 C5orf49A4QMS7 147 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 TMPRSS2O15393 492 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 MT-ND1P03886 318 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 ADH4P08319 380 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 FUT1P19526 365 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 FPR2P25090 351 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
CXCL12-202ENST00000374426 GCH1P30793 250 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 PCGF2P35227 344 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 AQP2P41181 271 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 DAP3P51398 398 aaKnown RBP11.67□□□□□ -0.54
CXCL12-202ENST00000374426 FMODQ06828 376 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 MBNL2Q5VZF2 373 aaKnown RBP11.67□□□□□ -0.54
CXCL12-202ENST00000374426 RFPL4BQ6ZWI9 263 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 AKR7LQ8NHP1 331 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms