RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 PRAMEF4O60810 478 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 LPLP06858 475 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 CPEP16870 476 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 TGM4P49221 684 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 MRPL58Q14197 206 aaKnown RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF266Q14584 549 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ELAVL1Q15717 326 aaKnown RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ARHGAP11BQ3KRB8 267 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM81Q6P7N7 255 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 RBMS3Q6XE24 437 aaKnown RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 DCXRQ7Z4W1 244 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 GRAMD2AQ8IUY3 354 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 PRSS35Q8N3Z0 413 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 OR13H1Q8NG92 308 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 OR51S1Q8NGJ8 323 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 PFN4Q8NHR9 129 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 C19orf43Q9BQ61 176 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF225Q9UK10 706 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 PLEKHM1Q9Y4G2 1056 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 RAB19A4D1S5 217 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 OR5K3A6NET4 321 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ARGFXA6NJG6 315 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF705GA8MUZ8 300 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SMLR1H3BR10 107 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SIX6O95475 246 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 IGFBP1P08833 259 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 RPS2P15880 293 aaKnown RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 M6PRP20645 277 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SLC19A1P41440 591 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 RPL27P61353 136 aaKnown RBP10.49□□□□□ -0.73
PTPRF-203ENST00000372407 TLE4Q04727 773 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF74Q16587 644 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 PAQR6Q6TCH4 344 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM99Q8N816 258 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 OR10R2Q8NGX6 335 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 SAMD10Q9BYL1 202 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ULBP3Q9BZM4 244 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 NRSN2Q9GZP1 204 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 LTB4R2Q9NPC1 389 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 GNG12Q9UBI6 72 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 ADAMTSL1Q8N6G6 1762 aa10.49□□□□□ -0.73
PTPRF-203ENST00000372407 FCMRO60667 390 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 CER1O95813 267 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 IRS1P35568 1242 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 ECI1P42126 302 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 TPBGQ13641 420 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 RDH10Q8IZV5 341 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 HSD17B11Q8NBQ5 300 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SCARB1Q8WTV0 552 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SLC25A43Q8WUT9 341 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 ABHD6Q9BV23 337 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SCPEP1Q9HB40 452 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 MBNL1Q9NR56 388 aaKnown RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 CASP8AP2Q9UKL3 1982 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 KIAA1551Q9HCM1 1747 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 TRBV5-4A0A0C4DH59 114 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 TPPPO94811 219 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 MRPL19P49406 292 aaKnown RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 DIO1P49895 249 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 PYCR3Q53H96 274 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 GLIPR1L1Q6UWM5 242 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 WDR88Q6ZMY6 472 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 LGI3Q8N145 548 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 OR52I2Q8NH67 350 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 HSD17B8Q92506 261 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 LRFN5Q96NI6 719 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 TBC1D29Q9UFV1 150 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 CGGBP1Q9UFW8 167 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 IGHEP01854 428 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 ACHEP22303 614 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 DUSP8Q13202 625 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 FOXB2Q5VYV0 432 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 OR52W1Q6IF63 320 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 FAHD1Q6P587 224 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF813Q6ZN06 617 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 MARCH3Q86UD3 253 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 ZFP82Q8N141 532 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SYS1Q8N2H4 156 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 NXPE3Q969Y0 559 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 MARC2Q969Z3 335 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 NKX3-1Q99801 234 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM43Q9BTV4 400 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 UBE2ZQ9H832 354 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 COA3Q9Y2R0 106 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 OIP5O43482 229 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 CD1CP29017 333 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SERPINF1P36955 418 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SRP9P49458 86 aaKnown RBP10.48□□□□□ -0.73
PTPRF-203ENST00000372407 PMPCAQ10713 525 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 ZNF77Q15935 545 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 C11orf91Q3C1V1 193 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 TMEM200AQ86VY9 491 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 PTOV1Q86YD1 416 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 FAM71CQ8NEG0 241 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 MUCL1Q96DR8 90 aa10.48□□□□□ -0.73
PTPRF-203ENST00000372407 SEH1LQ96EE3 360 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms