RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TFECO14948 347 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 MAGEB4O15481 346 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 CYTIPO60759 359 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 KRT8P05787 483 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 SPARCP09486 303 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 GAAP10253 952 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF24P17028 368 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 LAP3P28838 519 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 CSNK1A1P48729 337 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 SIRPAP78324 504 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 MRPL28Q13084 256 aaKnown RBP23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 DGUOKQ16854 277 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF845Q96IR2 970 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 TM9SF2Q99805 663 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 TTYH2Q9BSA4 534 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 TMED9Q9BVK6 235 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 ACOXLQ9NUZ1 547 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 GLTPQ9NZD2 209 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 KCNG2Q9UJ96 466 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 RCE1Q9Y256 329 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 FLVCR1Q9Y5Y0 555 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 SIRT4Q9Y6E7 314 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 METTL15A6NJ78 407 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 SYNGR4O95473 234 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 ITGB2P05107 769 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 QDPRP09417 244 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 GALP22466 123 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 TRAM1Q15629 374 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 RPL22L1Q6P5R6 122 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 SLC25A47Q6Q0C1 308 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 OR6N1Q8NGY5 312 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 RNF167Q9H6Y7 350 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 TRDV1A0A1B0GX56 115 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 OGG1O15527 345 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 TMCC2O75069 709 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF432O94892 652 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 SLC34A2O95436 690 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 EIF2S3P41091 472 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 RPS27P42677 84 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 RASGEF1BQ0VAM2 473 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 MEP1BQ16820 701 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 PCK2Q16822 640 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 DMKNQ6E0U4 476 aaPredicted RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 ARL9Q6T311 187 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 TMEM123Q8N131 208 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 TMEM54Q969K7 222 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 CCDC86Q9H6F5 360 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 TXNL4BQ9NX01 149 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 MCTS1Q9ULC4 181 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 GSTK1Q9Y2Q3 226 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 LIPGQ9Y5X9 500 aa23.36■■□□□ 1.33
ATPAF1-202ENST00000371937 HSPB2A8KAH6 182 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 RRP8O43159 456 aaKnown RBP23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 AQP8O94778 261 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 MPZL1O95297 269 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 FGF9P31371 208 aaPredicted RBP23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 SERPINB10P48595 397 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 PMP22Q01453 160 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 HSPB2Q16082 182 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 KCTD18Q6PI47 426 aaPredicted RBP23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 RPTNQ6XPR3 784 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 YIPF7Q8N8F6 280 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 OR10H5Q8NGA6 315 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 MRM2Q9UI43 246 aaKnown RBP23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 ST6GALNAC2Q9UJ37 374 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 IKZF2Q9UKS7 526 aa23.35■■□□□ 1.33
ATPAF1-202ENST00000371937 PRR32B1ATL7 298 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 PAX7P23759 505 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 TGM4P49221 684 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 FABP5Q01469 135 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF169Q14929 603 aaPredicted RBP23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 LRFN4Q6PJG9 635 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 CHMP1BQ7LBR1 199 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 TRMT61AQ96FX7 289 aaKnown RBP23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 GRIP1Q9Y3R0 1128 aa23.34■■□□□ 1.33
ATPAF1-202ENST00000371937 A0A1W2PPL8 197 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 PSMD9O00233 223 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 CD1AP06126 327 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 OR8G3PP0DMU2 310 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 CPN1P15169 458 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 CDK5R1Q15078 307 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 MS4A15Q8N5U1 240 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 SMIM19Q96E16 107 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 CDADC1Q9BWV3 514 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 SIAEQ9HAT2 523 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 ING1Q9UK53 422 aaPredicted RBP23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 CEP295Q9C0D2 2601 aa23.33■■□□□ 1.33
ATPAF1-202ENST00000371937 LRRTM2O43300 516 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 IGHG3P01860 377 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 PSKH1P11801 424 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 SELENOPP49908 381 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 ZNF133P52736 654 aaPredicted RBP23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 SLC3A1Q07837 685 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 EIF2B1Q14232 305 aaKnown RBP23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 C11orf40Q8WZ69 217 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 KCTD7Q96MP8 289 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 SEC61A2Q9H9S3 476 aa23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 FOXD3Q9UJU5 478 aaPredicted RBP23.33■■□□□ 1.32
ATPAF1-202ENST00000371937 APC2O95996 2303 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms