RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ELOVL1Q9BW60 279 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 GABARAPL3Q9BY60 117 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 PLA2G12AQ9BZM1 189 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OR11A1Q9GZK7 315 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 VCXQ9H320 206 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 UBQLN3Q9H347 655 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 EGLN3Q9H6Z9 239 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 FBXL17Q9UF56 701 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 POFUT2Q9Y2G5 429 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 RPH3AQ9Y2J0 694 aaPredicted RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 MED31Q9Y3C7 131 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 BOD1L1Q8NFC6 3051 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 ITPR1Q14643 2758 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 A0A087WZY1 265 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 A0A0U1RQK1 487 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 LOC100130705A0A1B0GUX0 176 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF320A2RRD8 509 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 OR2M5A3KFT3 312 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 A4D1N5 150 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 FAM90A8PA6NJQ4 464 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 EFCAB9A8MZ26 197 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 RRP8O43159 456 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 SPRY1O43609 319 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 OR7A10O76100 309 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TPPPO94811 219 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 GLSO94925 669 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 BGLAPP02818 100 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 FAM90A13PP0C7W8 464 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 FAM90A24PP0C7X0 464 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ACADSP16219 412 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 POU1F1P28069 291 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SRD5A2P31213 254 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 IFNGR2P38484 337 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 APOBEC1P41238 236 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 RANBP1P43487 201 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 HSPA13P48723 471 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 DSCR4P56555 118 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 ESRRGP62508 458 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ARG2P78540 354 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 GINS1Q14691 196 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 PTGES3Q15185 160 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF74Q16587 644 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 RFX4Q33E94 735 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 GXYLT1Q4G148 440 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 C1orf140Q5VVS0 124 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 LAIR2Q6ISS4 152 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ACSM5Q6NUN0 579 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 RASSF6Q6ZTQ3 369 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 YRDCQ86U90 279 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 GTPBP8Q8N3Z3 284 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 IQCF1Q8N6M8 205 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ATP6V1C2Q8NEY4 427 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 OR13C2Q8NGS9 318 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 OR51A7Q8NH64 312 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TMEM234Q8WY98 164 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ST8SIA2Q92186 375 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SGTBQ96EQ0 304 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ARL5BQ96KC2 179 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SAMD8Q96LT4 415 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 PITX2Q99697 317 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ANKRD60Q9BZ19 345 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SLC19A3Q9BZV2 496 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 PTGES2Q9H7Z7 377 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF556Q9HAH1 456 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 MCCC2Q9HCC0 563 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.16□□□□□ -1.9
MCF2-202ENST00000370573 SEC14L4Q9UDX3 406 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 STEAP1Q9UHE8 339 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 IL20RAQ9UHF4 553 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 OSGIN2Q9Y236 505 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SIGLEC7Q9Y286 467 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF337Q9Y3M9 751 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ALPK2Q86TB3 2170 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TRAV36DV7A0A075B6V5 113 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 TRAV27A0A087WT01 109 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 FAM166BA8MTA8 275 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 A8MVM7 634 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 FTCDNL1E5RQL4 147 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 F5H697 171 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 M0R129 80 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 BCKDKO14874 412 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF208O43345 1280 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 SPRY2O43597 315 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 FAM20BO75063 409 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 IGF2P01344 180 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ELANEP08246 267 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 GSTM3P21266 225 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 MYF6P23409 242 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 GGT2P36268 569 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 RPS5P46782 204 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 PCP4P48539 62 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 STARP49675 285 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ISL1P61371 349 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 CDK5Q00535 292 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 PDK3Q15120 406 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 CTU2Q2VPK5 515 aaKnown RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 TMEM176BQ3YBM2 270 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 GLYR1Q49A26 553 aaPredicted RBP3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZBED5Q49AG3 693 aa3.16□□□□□ -1.9
MCF2-202ENST00000370573 ZNF691Q5VV52 312 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms