RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CDH26Q8IXH8 852 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 ZNF595Q8IYB9 648 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 STPG2Q8N412 459 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 OR13C5Q8NGS8 318 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 OR6K3Q8NGY3 331 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 MOSPD2Q8NHP6 518 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 OR14A2Q96R54 314 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 GFI1Q99684 422 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 LMF2Q9BU23 707 aaKnown RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 SLC19A3Q9BZV2 496 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 SLC25A32Q9H2D1 315 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 NOX4Q9NPH5 578 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 MKKSQ9NPJ1 570 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 ANKRD10Q9NXR5 420 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 MTFP1Q9UDX5 166 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 OPN4Q9UHM6 478 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 ZNF107Q9UII5 783 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 PPIEQ9UNP9 301 aaKnown RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 MOKQ9UQ07 419 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 TRBV23OR9-2A0A075B6M9 112 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 A0A1B0GWA3 101 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 ZNF891A8MT65 544 aaPredicted RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 SULT1C2O00338 296 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 NKX2-8O15522 239 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 SCO1O75880 301 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 GLCEO94923 617 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 UBBP0CG47 229 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 UBCP0CG48 685 aaKnown RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 ZNF888P0CJ79 500 aaPredicted RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 NAT1P18440 290 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 AGTR1P30556 359 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 PTGER1P34995 402 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 RAD52P43351 418 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 RPS27AP62979 156 aaKnown RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 UBA52P62987 128 aaKnown RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 SRSF4Q08170 494 aaKnown RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 ZNF141Q15928 474 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 Q499Y3 187 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 TMEM69Q5SWH9 247 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 SFRP4Q6FHJ7 346 aaPredicted RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 SLC25A25Q6KCM7 469 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 ULK3Q6PHR2 472 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 TMUB2Q71RG4 321 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 ABHD13Q7L211 337 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 CHMP1BQ7LBR1 199 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 PRSS45Q7RTY3 260 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 NUP54Q7Z3B4 507 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 KRT77Q7Z794 578 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 CAMKVQ8NCB2 501 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 BVESQ8NE79 360 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR52E2Q8NGJ4 325 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR6M1Q8NGM8 313 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR5M9Q8NGP3 310 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR6N1Q8NGY5 312 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR10G6Q8NH81 332 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 LIPHQ8WWY8 451 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 ST8SIA4Q92187 359 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 CTHRC1Q96CG8 243 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 SGTBQ96EQ0 304 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 TNFRSF13CQ96RJ3 184 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 SLC38A3Q99624 504 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 NRTNQ99748 197 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR10A4Q9H209 315 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 XKR8Q9H6D3 395 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 TBC1D29Q9UFV1 150 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 OR5V1Q9UGF6 321 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 KCNE5Q9UJ90 142 aa10.43□□□□□ -0.74
USF1-201ENST00000368019 TMEM184BQ9Y519 407 aaPredicted RBP10.43□□□□□ -0.74
USF1-201ENST00000368019 SPTAN1Q13813 2472 aaKnown RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 TRAV27A0A087WT01 109 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 CENPVL1A0A0U1RR11 272 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 LOC101059948A0A1B0GTJ6 334 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 CLEC18AA5D8T8 446 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 F5H5P2 479 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PHYHO14832 338 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 XRCC3O43542 346 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 NDUFA2O43678 99 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 DUX1O43812 170 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 GKN3PP0CG01 181 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 CLUP10909 449 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 ACAA2P42765 397 aaKnown RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 TAS2R20P59543 309 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PRPS1P60891 318 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 MAT1AQ00266 395 aaKnown RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 HHEXQ03014 270 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PLAURQ03405 335 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 CBFBQ13951 182 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PRICKLE4Q2TBC4 344 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 NDUFAF6Q330K2 333 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 RNASE12Q5GAN4 147 aaKnown RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 TMEM255AQ5JRV8 349 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 CLEC18BQ6UXF7 455 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 GSG1LQ6UXU4 331 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 STAC2Q6ZMT1 411 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 FCRLAQ7L513 359 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 SLC16A9Q7RTY1 509 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 FAM220AQ7Z4H9 259 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms