RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 HIST2H3AQ71DI3 136 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 NAXDQ8IW45 347 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 NAT6Q93015 286 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 MR1Q95460 341 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 GAREM1Q9H706 876 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 CACNA1HO95180 2353 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 PCNX1Q96RV3 2341 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 LIPNQ5VXI9 398 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 TMPRSS11FQ6ZWK6 438 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 PCBP4P57723 403 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 C1orf140Q5VVS0 124 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 KIAA0895LQ68EN5 471 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 CMTM4Q8IZR5 234 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 CRB3Q9BUF7 120 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 ATP6V1G2-DDX39BF2Z307 99 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC34A2O95436 690 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 DHPSP49366 369 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR51D1Q8NGF3 324 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR5L1Q8NGL2 311 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 PHYHIPLQ96FC7 376 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 TIAL1Q01085 375 aaKnown RBP eCLIP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 AADACL4Q5VUY2 407 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF100Q8IYN0 542 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF511Q8NB15 262 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 RSPRY1Q96DX4 576 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 DUSP23Q9BVJ7 150 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR52A1Q9UKL2 312 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 OLFM2O95897 454 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 RPL27P61353 136 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 METTL9Q9H1A3 318 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 NDRG3Q9UGV2 375 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 CPN1P15169 458 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SRP9P49458 86 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 TOMM34Q15785 309 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 B3GLCTQ6Y288 498 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 H1FNTQ75WM6 255 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC35D2Q76EJ3 337 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 NT5CQ8TCD5 201 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 RASD2Q96D21 266 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 K7ESM1 405 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SELENOFO60613 162 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 PSMB6P28072 239 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 P2RX1P51575 399 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 RAE1P78406 368 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 GLDNQ6ZMI3 551 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 KLF15Q9UIH9 416 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 MRPS28Q9Y2Q9 187 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR1D4P47884 311 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 COMMD1Q8N668 190 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 GLYATL2Q8WU03 294 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 ARPC3O15145 178 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SHOXO15266 292 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 RAD1O60671 282 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 CDH26Q8IXH8 852 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SENP5Q96HI0 755 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 SELENOIQ9C0D9 397 aa10.81□□□□□ -0.68
CDC42BPA-202ENST00000366764 DBPQ10586 325 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 H3F3CQ6NXT2 135 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 WDR5BQ86VZ2 330 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 ST8SIA1Q92185 356 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLEK2Q9NYT0 353 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 HMSDA8MTL9 139 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 AGPAT2O15120 278 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 APEHP13798 732 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 CD22P20273 847 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 THAP3Q8WTV1 239 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 Q96M85 177 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 EXOGQ9Y2C4 368 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 ANXA7P20073 488 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 TMPPEQ6ZT21 453 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR2AK2Q8NG84 335 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 ST6GAL2Q96JF0 529 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 TMED7-TICAM2A0A0A6YYA0 188 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 NSA2O95478 260 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 PVRP15151 417 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 APOBEC1P41238 236 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 FAM69BQ5VUD6 431 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 RELTQ969Z4 430 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 TEX101Q9BY14 249 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 GPATCH2Q9NW75 528 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 NXT1Q9UKK6 140 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 TMED7Q9Y3B3 224 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 DOCK11Q5JSL3 2073 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 SGCEO43556 437 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF28P17035 718 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 CSRP3P50461 194 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR10K2Q6IF99 312 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 ARIH2OSQ8N7S6 290 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 HEATR5AQ86XA9 2040 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 KIAA0907Q7Z7F0 614 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 GABRG1Q8N1C3 465 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR1J2Q8NGS2 313 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 MYEOVQ96EZ4 313 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLA2G12AQ9BZM1 189 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 LAT2Q9GZY6 243 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 LDAHQ9H6V9 325 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 FXYD4P59646 89 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 RCBTB1Q8NDN9 531 aa10.8□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR13C9Q8NGT0 318 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms