RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CD1CP29017 333 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 LIPAP38571 399 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF252P-AS1Q0IIN9 211 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 LTB4RQ15722 352 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 C17orf107Q6ZR85 190 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ABHD6Q9BV23 337 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 SIX6O95475 246 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 FGF7P21781 194 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 AANATQ16613 207 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 Q6ZTK2 550 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 PNPLA1Q8N8W4 532 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 RLN3Q8WXF3 142 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 BOD1Q96IK1 185 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TMEM38AQ9H6F2 299 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 GLB1P16278 677 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 RRADP55042 308 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 AAED1Q7RTV5 226 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 RIMS4Q9H426 269 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 MROH6A6NGR9 719 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 AQP7P3A6NL99 342 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 C1orf105O95561 183 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 SMIM6P0DI80 62 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 BIDP55957 195 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 RTP2Q5QGT7 225 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 OTUD1Q5VV17 481 aaPredicted RBP10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 CDH26Q8IXH8 852 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ABHD4Q8TB40 342 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TVP23CQ96ET8 276 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 HES7Q9BYE0 225 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 NAGAP17050 411 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 HTR2CP28335 458 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 RPS25P62851 125 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 EXOSC2Q13868 293 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 NLRC3Q7RTR2 1065 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 CPEB2Q7Z5Q1 589 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 LSMEM1Q8N8F7 131 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 OR10J5Q8NHC4 309 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ASIC5Q9NY37 505 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 OR13C7P0DN81 318 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC17A1Q14916 467 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 Q6ZRG5 221 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 TIPARPQ7Z3E1 657 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 LYSMD1Q96S90 227 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 SIGLEC6O43699 453 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ENDOGQ14249 297 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 IQCJQ1A5X6 159 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 LINC00346Q8IVM7 164 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 LANCL2Q9NS86 450 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 MRPS28Q9Y2Q9 187 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 MMP7P09237 267 aaPredicted RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 OR5I1Q13606 314 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 FOXB2Q5VYV0 432 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 OR6M1Q8NGM8 313 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ASB11Q8WXH4 323 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 NDRG4Q9ULP0 352 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 PPP1R3CQ9UQK1 317 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 SCN2AQ99250 2005 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 PRRC2BQ5JSZ5 2229 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF264O43296 627 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 CSO75390 466 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 SMIM17P0DL12 118 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 UBR2Q8IWV8 1755 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 OR6C76A6NM76 312 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 RGS13O14921 159 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ENPP1P22413 925 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 TNFRSF4P43489 277 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 FOXA1P55317 472 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 RAB33AQ14088 237 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 C11orf42Q8N5U0 333 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 NEURL2Q9BR09 285 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 PARP12Q9H0J9 701 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 NXT1Q9UKK6 140 aaKnown RBP10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 SPAG17Q6Q759 2223 aa10.61□□□□□ -0.71
SPTBN1-202ENST00000356805 ACOD1A6NK06 481 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 UMAD1C9J7I0 102 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 H7BYZ3 331 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CHRM2P08172 466 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 C4orf17Q53FE4 359 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF626Q68DY1 528 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 HSD11B1LQ7Z5J1 315 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 PELI3Q8N2H9 469 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 PRSS35Q8N3Z0 413 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 KIR2DS5A0A0G2JLQ3 304 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 A0A0G2JNG1 304 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 KIR2DS3K7RE56 304 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 HOXC11O43248 304 aaPredicted RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 HPNP05981 417 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CPMP14384 443 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 DCDP81605 110 aaKnown RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 KIR2DS5Q14953 304 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 LMNTD1Q8N9Z9 388 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 TIMM29Q9BSF4 260 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 NECAP2Q9NVZ3 263 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms