RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PROS1P07225 676 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 FGF2P09038 288 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 RPA2P15927 270 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 EN2P19622 333 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-202ENST00000352393 ACTBP60709 375 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 ACTG1P63261 375 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 ZNF117Q03924 483 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 TEX30Q5JUR7 227 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 ZNF660Q6AZW8 331 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-202ENST00000352393 GABRG1Q8N1C3 465 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 ASB17Q8WXJ9 295 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 DVL3Q92997 716 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-202ENST00000352393 SLC25A28Q96A46 364 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 RTN4RQ9BZR6 473 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 TTYH1Q9H313 450 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-202ENST00000352393 TMEM138Q9NPI0 162 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 EPHA6Q9UF33 1036 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 SLC22A13Q9Y226 551 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 CTSEP14091 401 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 SLC6A8P48029 635 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 OTPQ5XKR4 325 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 SLC35D2Q76EJ3 337 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 ZNF679Q8IYX0 411 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 DMRTA2Q96SC8 542 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 GPR27Q9NS67 375 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 B9D1Q9UPM9 204 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 H3BUI4 141 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 PNPP00491 289 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 GMFBP60983 142 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 C4orf46Q504U0 113 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 OR1J4Q8NGS1 313 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 OR1S1Q8NH92 325 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 SLC46A1Q96NT5 459 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 ATG5Q9H1Y0 275 aa22.12■■□□□ 1.13
CPNE1-202ENST00000352393 A0A0C4DFX4 3053 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 SLC22A23A1A5C7 686 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 FRG2CA6NGY1 282 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 EPOPA6NHQ4 379 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 XKRYO14609 159 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 ICOSLGO75144 302 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 MAZP56270 477 aaKnown RBP22.11■■□□□ 1.13
CPNE1-202ENST00000352393 ROM1Q03395 351 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 ARHGAP40Q5TG30 622 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 C1QL3Q5VWW1 255 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 TMEM225Q6GV28 225 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 HSD17B13Q7Z5P4 300 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-202ENST00000352393 CDH26Q8IXH8 852 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 OR5M9Q8NGP3 310 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 OR6K3Q8NGY3 331 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 OR8S1Q8NH09 359 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 ZNF519Q8TB69 540 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 POFUT1Q9H488 388 aa22.11■■□□□ 1.13
CPNE1-202ENST00000352393 TRAV36DV7A0A075B6V5 113 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 CHURC1-FNTBB4DL54 471 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 SULT1C2O00338 296 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 FCER2P06734 321 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 DRD1P21728 446 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 MPGP29372 298 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 FNTBP49356 437 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 TAS2R19P59542 299 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 SORDQ00796 357 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 MFGE8Q08431 387 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-202ENST00000352393 HYAL1Q12794 435 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 PLPP7Q8NBV4 271 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 BVESQ8NE79 360 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 ADOQ96SZ5 270 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 LANCL2Q9NS86 450 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 MRPL22Q9NWU5 206 aaKnown RBP22.1■■□□□ 1.13
CPNE1-202ENST00000352393 COL5A1P20908 1838 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-202ENST00000352393 PRSS37A4D1T9 235 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 C11orf98E9PRG8 122 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 RAD1O60671 282 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 HLA-DQA2P01906 255 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 THEGLP0DJG4 465 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 PBX2P40425 430 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 CAPZBP47756 277 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 C9orf50Q5SZB4 431 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 SLC18B1Q6NT16 456 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 C11orf88Q6PI97 169 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 FAM160A2Q8N612 972 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-202ENST00000352393 TMEM229BQ8NBD8 167 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 ZBTB44Q8NCP5 570 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 DUSP19Q8WTR2 217 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 C8orf44Q96CB5 159 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 SEH1LQ96EE3 360 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 FOXN4Q96NZ1 517 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 NKX3-1Q99801 234 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-202ENST00000352393 S1PR5Q9H228 398 aa22.1■■□□□ 1.13
CPNE1-202ENST00000352393 CACNA1CQ13936 2221 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 TRAV14DV4A0A0A6YYC5 116 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 IGLV1-36A0A0B4J1U3 117 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 RFPL4AA6NLU0 287 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 RFPL4AL1F8VTS6 287 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 PMS2P2O95744 297 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 FSTP19883 344 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 CXCR1P25024 350 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 TOMM34Q15785 309 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-202ENST00000352393 LY6G6FQ5SQ64 297 aa22.09■■□□□ 1.13
CPNE1-202ENST00000352393 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-202ENST00000352393 CHRDL2Q6WN34 429 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms