RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 C3P1Q6ZMU1 363 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 SLAMF6Q96DU3 332 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 PCOLCE2Q9UKZ9 415 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 MRPS28Q9Y2Q9 187 aaKnown RBP12.43□□□□□ -0.42
SMC6-201ENST00000351948 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 VAMP5O95183 116 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 GIFP27352 417 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 DBPQ10586 325 aaPredicted RBP12.43□□□□□ -0.42
SMC6-201ENST00000351948 MYBPHQ13203 477 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 ANKRD16Q6P6B7 361 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 D2HGDHQ8N465 521 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 FAM26EQ8N5C1 309 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 TAS2R8Q9NYW2 309 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 COQ3Q9NZJ6 369 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 CCL27Q9Y4X3 112 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 DOCK6Q96HP0 2047 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 PRSS37A4D1T9 235 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 BET1O15155 118 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 FZD7O75084 574 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 TBXA2RP21731 343 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 STARD6P59095 220 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 WDR74Q6RFH5 385 aaPredicted RBP12.43□□□□□ -0.42
SMC6-201ENST00000351948 ADAMTS14Q8WXS8 1223 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 INTS12Q96CB8 462 aaKnown RBP12.43□□□□□ -0.42
SMC6-201ENST00000351948 BCL7BQ9BQE9 202 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 ACACAQ13085 2346 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 IGKV1-8A0A0C4DH67 115 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 DNASE1P24855 282 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 RGS19P49795 217 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 ADPRMQ3LIE5 342 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 ZAR1Q86SH2 424 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 PSMF1Q92530 271 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 SLC22A13Q9Y226 551 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 UPK1BO75841 260 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 GPANK1O95872 356 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 APEX1P27695 318 aaKnown RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 LAP3P28838 519 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CD40LGP29965 261 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 ZNF93P35789 620 aaPredicted RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 ZNF766Q5HY98 468 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 VASH1Q7L8A9 365 aaPredicted RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 TAAR8Q969N4 342 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 ACKR4Q9NPB9 350 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CCDC59Q9P031 241 aaKnown RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 TCFL5Q9UL49 500 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 A0A087WUJ7 227 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 B4DXG7 233 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 TEX46H3BTG2 121 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 ITGB2P05107 769 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 EBPQ15125 230 aaKnown RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 TOMM34Q15785 309 aaPredicted RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 DESI1Q6ICB0 168 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 ZFAND2BQ8WV99 257 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 C3orf49Q96BT1 292 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 RRNAD1Q96FB5 475 aaKnown RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 METTL9Q9H1A3 318 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CACNG2Q9Y698 323 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 A0A1W2PR80 420 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 SURF4O15260 269 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CD34P28906 385 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 BLVRBP30043 206 aaPredicted RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 LCN10Q6JVE6 187 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CMSS1Q9BQ75 279 aaKnown RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 BANF2Q9H503 90 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 NGBQ9NPG2 151 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 GPR173Q9NS66 373 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 DNAJB12Q9NXW2 375 aaKnown RBP12.42□□□□□ -0.42
SMC6-201ENST00000351948 B3GALT5Q9Y2C3 310 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 PCDHGA5Q9Y5G8 931 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CCDC163A0A0D9SF12 145 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 SLC22A20A6NK97 555 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 DIO1P49895 249 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 FMODQ06828 376 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 PPA1Q15181 289 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 SLC35D3Q5M8T2 416 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 WFDC8Q8IUA0 241 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CCDC36Q8IYA8 594 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 NANOGP1Q8N7R0 232 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 OR10K1Q8NGX5 313 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CREB3L1Q96BA8 519 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CHST2Q9Y4C5 530 aa12.42□□□□□ -0.42
SMC6-201ENST00000351948 CTSBP07858 339 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 FAHD1Q6P587 224 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 GALNT16Q8N428 558 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 PPP1R35Q8TAP8 253 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 C10orf90Q96M02 699 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 OXGR1Q96P68 337 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 TXNIPQ9H3M7 391 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 LIN7BQ9HAP6 207 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 ALPK2Q86TB3 2170 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 ANKUB1A6NFN9 424 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 HMX3A6NHT5 357 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 F5H0A9 414 aaPredicted RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 SNRPD2P62316 118 aaKnown RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 FZD5Q13467 585 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms