RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TCTN2Q96GX1 697 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 LANCL2Q9NS86 450 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 M0QYG6 137 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 LDOC1O95751 146 aaPredicted RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 CXCR1P25024 350 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 PPICP45877 212 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 INSM1Q01101 510 aaPredicted RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 TUSC1Q2TAM9 212 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 B3GNTL1Q67FW5 361 aaPredicted RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 TMUB2Q71RG4 321 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 DUSP19Q8WTR2 217 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 OR11A1Q9GZK7 315 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 MS4A7Q9GZW8 240 aaPredicted RBP16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 SDHAF2Q9NX18 166 aa16.32■□□□□ 0.2
PTP4A3-202ENST00000349124 TCRBV16S1A1N1A0A5B0 115 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 BGLAPP02818 100 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 LPLP06858 475 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 NMBP08949 121 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 CTLA4P16410 223 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 MNDAP41218 407 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 MECP2P51608 486 aaKnown RBP16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 NR0B1P51843 470 aaKnown RBP16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 EGR3Q06889 387 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 SLC17A1Q14916 467 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 GPAT4Q86UL3 456 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 OR2AK2Q8NG84 335 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 OR51A2Q8NGJ7 313 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 METTL21AQ8WXB1 218 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 MRI1Q9BV20 369 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 NUDT9Q9BW91 350 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 PRKACBP22694 351 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 DLX5P56178 289 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 C4orf46Q504U0 113 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 KIAA0895LQ68EN5 471 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 NDUFAF7Q7L592 441 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 ADGRG3Q86Y34 549 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 OR1J4Q8NGS1 313 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 PNPLA2Q96AD5 504 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 OR8B4Q96RC9 309 aa16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 ZNF230Q9UIE0 474 aaPredicted RBP16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 CDV3Q9UKY7 258 aaKnown RBP16.31■□□□□ 0.2
PTP4A3-202ENST00000349124 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 DCDC2BA2VCK2 349 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 LMX1BO60663 402 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 HLA-DOBP13765 273 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 S100A11P31949 105 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 PRSS3P35030 304 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 RGS7BPQ6MZT1 257 aaPredicted RBP16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 TNFAIP8L1Q8WVP5 186 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 ADIPOR1Q96A54 375 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 KLHDC7BQ96G42 594 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 SLC38A3Q99624 504 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 NPAS1Q99742 590 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 LRP4O75096 1905 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 C2orf72A6NCS6 295 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 SHISA7A6NL88 538 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 XKRYO14609 159 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 IGF2P01344 180 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 IL11P20809 199 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 CAPZBP47756 277 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 RAB11BQ15907 218 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 VWA2Q5GFL6 755 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 GLYATL3Q5SZD4 288 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 C16orf47Q6ZP98 133 aaPredicted RBP16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 SPERTQ8NA61 448 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 EXO5Q9H790 373 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 TAS2R4Q9NYW5 299 aa16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 MRPS18BQ9Y676 258 aaKnown RBP16.3■□□□□ 0.2
PTP4A3-202ENST00000349124 FREM3P0C091 2139 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 UBE2QL1A1L167 161 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 SORDQ00796 357 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 RASGEF1BQ0VAM2 473 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 EMC4Q5J8M3 183 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 C17orf107Q6ZR85 190 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 TMED4Q7Z7H5 227 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 WDFY1Q8IWB7 410 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 CLEC1AQ8NC01 280 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 PTDSS2Q9BVG9 487 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 TINAGL1Q9GZM7 467 aaPredicted RBP16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 MMP17Q9ULZ9 603 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 PLCL2Q9UPR0 1127 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 OR6A2O95222 327 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 DDAH2O95865 285 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 CSF2RBP32927 897 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 SKP1P63208 163 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 BIKQ13323 160 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 STEAP1BQ6NZ63 245 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 C11orf88Q6PI97 169 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 STPG2Q8N412 459 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 GALNT16Q8N428 558 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 OR6N1Q8NGY5 312 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 LMX1AQ8TE12 382 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 ZNF578Q96N58 590 aaPredicted RBP16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 MESP1Q9BRJ9 268 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 TPSD1Q9BZJ3 242 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 FBXL2Q9UKC9 423 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 TMEM14AQ9Y6G1 99 aa16.29■□□□□ 0.2
PTP4A3-202ENST00000349124 PRSS37A4D1T9 235 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms