RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 SPEM2Q0P670 501 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 C12orf73Q69YU5 71 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 ULK3Q6PHR2 472 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 TMEM163Q8TC26 289 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 ARSGQ96EG1 525 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 THAP7Q9BT49 309 aaPredicted RBP13.29□□□□□ -0.28
PBX3-201ENST00000342287 NDUFB11Q9NX14 153 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 NKIRAS2Q9NYR9 191 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 RPS6KB2Q9UBS0 482 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 LOXL2Q9Y4K0 774 aa13.29□□□□□ -0.28
PBX3-201ENST00000342287 C5orf52A6NGY3 159 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 KLF4O43474 513 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 OIP5O43482 229 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 PIP5K1CO60331 668 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 HPP00738 406 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 HPXP02790 462 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 ABCD3P28288 659 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 BTCP35070 178 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 GPR4P46093 362 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 POU4F2Q12837 409 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 PDZK1IP1Q13113 114 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 GINS1Q14691 196 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 PAQR6Q6TCH4 344 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 TMEM17Q86X19 198 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 CDK20Q8IZL9 346 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 FAM71CQ8NEG0 241 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 OR10H5Q8NGA6 315 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 RNASE11Q8TAA1 199 aaKnown RBP13.28□□□□□ -0.28
PBX3-201ENST00000342287 TM9SF4Q92544 642 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 ARL6Q9H0F7 186 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 CLN6Q9NWW5 311 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 ZNF223Q9UK11 482 aaPredicted RBP13.28□□□□□ -0.28
PBX3-201ENST00000342287 SPDEFO95238 335 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 CCR6P51684 374 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 NRG3P56975 720 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 SNRPGP62308 76 aaKnown RBP13.28□□□□□ -0.28
PBX3-201ENST00000342287 CDK5Q00535 292 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 INSM1Q01101 510 aaPredicted RBP13.28□□□□□ -0.28
PBX3-201ENST00000342287 NDUFAF6Q330K2 333 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 RNASE12Q5GAN4 147 aaKnown RBP13.28□□□□□ -0.28
PBX3-201ENST00000342287 ALG10BQ5I7T1 473 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 METAP1DQ6UB28 335 aaPredicted RBP13.28□□□□□ -0.28
PBX3-201ENST00000342287 SVBPQ8N300 66 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 PXT1Q8NFP0 134 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 OR10K1Q8NGX5 313 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 GATAD2BQ8WXI9 593 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 HSD17B8Q92506 261 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 PISDQ9UG56 409 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 MED31Q9Y3C7 131 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
PBX3-201ENST00000342287 UBE2CO00762 179 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 ARPC5O15511 151 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 EEF1E1O43324 174 aaKnown RBP13.27□□□□□ -0.28
PBX3-201ENST00000342287 RBM34P42696 430 aaKnown RBP13.27□□□□□ -0.28
PBX3-201ENST00000342287 SKP2Q13309 424 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 HABP2Q14520 560 aaPredicted RBP13.27□□□□□ -0.28
PBX3-201ENST00000342287 PPA1Q15181 289 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 CD226Q15762 336 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 GSG1Q2KHT4 349 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 CRTC2Q53ET0 693 aaPredicted RBP13.27□□□□□ -0.28
PBX3-201ENST00000342287 APOOLQ6UXV4 268 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 GATSQ8NAP1 163 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 POGLUT1Q8NBL1 392 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 NUBPLQ8TB37 319 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 OSTF1Q92882 214 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 CPNE4Q96A23 557 aaPredicted RBP13.27□□□□□ -0.28
PBX3-201ENST00000342287 RFT1Q96AA3 541 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 EGLN3Q9H6Z9 239 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 EXOSC3Q9NQT5 275 aaKnown RBP13.27□□□□□ -0.28
PBX3-201ENST00000342287 EXTL2Q9UBQ6 330 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 NUBP2Q9Y5Y2 271 aa13.27□□□□□ -0.28
PBX3-201ENST00000342287 PLSCR5A0PG75 271 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 C4orf47A7E2U8 309 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 MCRIP1C9JLW8 97 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 ZNF264O43296 627 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 NGFRP08138 427 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 S100A11P31949 105 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 CLINT1Q14677 625 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 ISXQ2M1V0 245 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 KLBQ86Z14 1044 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 ARRDC1Q8N5I2 433 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 OR8J1Q8NGP2 316 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 C8orf44Q96CB5 159 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 IL4I1Q96RQ9 567 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 ZPBPQ9BS86 351 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 SOX7Q9BT81 388 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 PLA2G12AQ9BZM1 189 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 ENKD1Q9H0I2 346 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 SLC25A19Q9HC21 320 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 CRLF2Q9HC73 371 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 ZFP57Q9NU63 452 aa13.27□□□□□ -0.29
PBX3-201ENST00000342287 C1orf196B1AJZ1 125 aa13.26□□□□□ -0.29
PBX3-201ENST00000342287 PRR23D1E9PI22 279 aaPredicted RBP13.26□□□□□ -0.29
PBX3-201ENST00000342287 RBBP9O75884 186 aa13.26□□□□□ -0.29
PBX3-201ENST00000342287 MBP02144 154 aa13.26□□□□□ -0.29
PBX3-201ENST00000342287 PRR23D2P0DMB1 279 aaPredicted RBP13.26□□□□□ -0.29
PBX3-201ENST00000342287 PTNP21246 168 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms