RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FBLP22087 321 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 CCKBRP32239 447 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 FAUP35544 74 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 INSM1Q01101 510 aaPredicted RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 ROM1Q03395 351 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 PCGF3Q3KNV8 242 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 RNF128Q8TEB7 428 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 DPCDQ9BVM2 203 aaPredicted RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 GPN1Q9HCN4 374 aaPredicted RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 ZNF304Q9HCX3 659 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 TAS2R8Q9NYW2 309 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ZNF69Q9UC07 566 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 TMED7Q9Y3B3 224 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 SPEGQ15772 3267 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 IGLV1-36A0A0B4J1U3 117 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 TTLL8A6PVC2 850 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 A8MVM7 634 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ANXA7P20073 488 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 POU3F4P49335 361 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ARL4DP49703 201 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 PUDPQ08623 228 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 TDGQ13569 410 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
TDP2-201ENST00000341060 C1orf140Q5VVS0 124 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ADGRG3Q86Y34 549 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 FTMTQ8N4E7 242 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 MEIOBQ8N635 442 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ZNF441Q8N8Z8 693 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 OR51D1Q8NGF3 324 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 C17orf50Q8WW18 174 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 CA10Q9NS85 328 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 MGAT4CQ9UBM8 478 aa13.12□□□□□ -0.31
TDP2-201ENST00000341060 ADAMTS9Q9P2N4 1935 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 IGHV1OR21-1A0A087WYE8 117 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 SLC17A2O00624 439 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 SLC16A7O60669 478 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 PNPP00491 289 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 CSF1P09603 554 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
TDP2-201ENST00000341060 CTLA4P16410 223 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 EFNB2P52799 333 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 DHODHQ02127 395 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 GRINAQ7Z429 371 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 UXS1Q8NBZ7 420 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 MARVELD3Q96A59 401 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 FOXN4Q96NZ1 517 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 PIPOXQ9P0Z9 390 aa13.11□□□□□ -0.31
TDP2-201ENST00000341060 CDV3Q9UKY7 258 aaKnown RBP13.11□□□□□ -0.31
TDP2-201ENST00000341060 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 FADS1O60427 444 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 SPARCP09486 303 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 SRFP11831 508 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OR1D5P58170 312 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 TSPAN5P62079 268 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 ADAM8P78325 824 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OTPQ5XKR4 325 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 ASPHD2Q6ICH7 369 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
TDP2-201ENST00000341060 CCDC28AQ8IWP9 274 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 ELMOD2Q8IZ81 293 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 D2HGDHQ8N465 521 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OR4C16Q8NGL9 310 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 GPR119Q8TDV5 335 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 VN1R1Q9GZP7 353 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 LMAN1LQ9HAT1 526 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 SLC17A5Q9NRA2 495 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 UBQLN2Q9UHD9 624 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 SLC22A13Q9Y226 551 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OR2A4O95047 310 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OR6A2O95222 327 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 NXPH1P58417 271 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 RAP2BP61225 183 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 CFHR1Q03591 330 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 RIPPLY1Q0D2K3 151 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 C5orf46Q6UWT4 87 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 KRT77Q7Z794 578 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 PLXDC1Q8IUK5 500 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 CADM4Q8NFZ8 388 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 STK35Q8TDR2 534 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 FAM3DQ96BQ1 224 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 RBP7Q96R05 134 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 OR2A7Q96R45 310 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 CHIAQ9BZP6 476 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
TDP2-201ENST00000341060 LOC100289279A0A1B0GTE1 492 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 A0A1B0GX78 115 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 PYCARD-AS1I3L0S3 204 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 M0R233 179 aa13.09□□□□□ -0.31
TDP2-201ENST00000341060 PLPP3O14495 311 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms