RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ACAA2P42765 397 aaKnown RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 PAX8Q06710 450 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 FXNQ16595 210 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 GKAP1Q5VSY0 366 aaPredicted RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 NANOGP8Q6NSW7 305 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 CGB2Q6NT52 195 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 Q6YL49 198 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 OR10A6Q8NH74 314 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 RP9Q8TA86 221 aaKnown RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 DNAJA4Q8WW22 397 aaPredicted RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 DYRK2Q92630 601 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 ELAC2Q9BQ52 826 aaKnown RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 IKZF5Q9H5V7 419 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 KAT8Q9H7Z6 458 aaKnown RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 NANOGQ9H9S0 305 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 TMEM27Q9HBJ8 222 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 NOX4Q9NPH5 578 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 HINT3Q9NQE9 182 aaKnown RBP12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 TMEM229AB2RXF0 380 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 K7EIL1 84 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 UPK3AO75631 287 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 IFNA14P01570 189 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 PPIAL4GP0DN37 164 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 PNMTP11086 282 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 ZNF35P13682 527 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 FUT4P22083 530 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 SELENOPP49908 381 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 RGS8P57771 180 aaPredicted RBP12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 ERICH5Q6P6B1 374 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 RANBP3LQ86VV4 465 aaPredicted RBP12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 UPRTQ96BW1 309 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 SF3B5Q9BWJ5 86 aaKnown RBP12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 FAM107BQ9H098 131 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 PIF1Q9H611 641 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 TAAR3PQ9P1P4 343 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
CTHRC1-201ENST00000330295 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 GMNCA6NCL1 334 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 FBP2O00757 339 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 NDUFAB1O14561 156 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 TPD52L2O43399 206 aaKnown RBP12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 XPNPEP2O43895 674 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 ZNF432O94892 652 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 AHSA1O95433 338 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 IMPDH2P12268 514 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 PRG2P13727 222 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 GTF2E2P29084 291 aaKnown RBP12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 CD80P33681 288 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 CAPZA2P47755 286 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 ARF1P84077 181 aaKnown RBP12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 PLAURQ03405 335 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 CD69Q07108 199 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 C5orf46Q6UWT4 87 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 BRD3OSQ6XYD6 125 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 NET1Q7Z628 596 aaPredicted RBP12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 OR10S1Q8NGN2 331 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 STK35Q8TDR2 534 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 SNX33Q8WV41 574 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 CMTM5Q96DZ9 223 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 OCSTAMPQ9BR26 566 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 EFCAB1Q9HAE3 211 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 SAP30LQ9HAJ7 183 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 C12orf10Q9HB07 376 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 DECR2Q9NUI1 292 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 GPR160Q9UJ42 338 aa12.42□□□□□ -0.42
CTHRC1-201ENST00000330295 M0QX08 132 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 GPR37O15354 613 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 GPR137BO60478 399 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 MFN2O95140 757 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 MELTFP08582 738 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 LSP1P33241 339 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 GALK2Q01415 458 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 VMACQ2NL98 169 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 FOXB2Q5VYV0 432 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 FAM91A1Q658Y4 838 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 ULK3Q6PHR2 472 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 GPAT4Q86UL3 456 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 PTOV1Q86YD1 416 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 LSMEM1Q8N8F7 131 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 CCL17Q92583 94 aa12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 MARS2Q96GW9 593 aaKnown RBP12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 HOPXQ9BPY8 73 aaPredicted RBP12.41□□□□□ -0.42
CTHRC1-201ENST00000330295 A8MXK9 166 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 OR2T1O43869 369 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 VAMP5O95183 116 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 COX4I1P13073 169 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 PCBP3P57721 371 aaKnown RBP12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 SEC61A1P61619 476 aaKnown RBP12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 GNGT1P63211 74 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 HOXC5Q00444 222 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 DBPQ10586 325 aaPredicted RBP12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 CEACAM7Q14002 265 aa12.4□□□□□ -0.42
CTHRC1-201ENST00000330295 SELPLGQ14242 412 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms