RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PLEKHJ1Q9NW61 149 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 COA3Q9Y2R0 106 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 CIB4A0PJX0 185 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ATP6V1G2-DDX39BF2Z307 99 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF749O43361 778 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 PRKNO60260 465 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 NSA2O95478 260 aaKnown RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 CD38P28907 300 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 PPICP45877 212 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF85Q03923 595 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RSU1Q15404 277 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 WDR88Q6ZMY6 472 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 KDM8Q8N371 416 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RAB3CQ96E17 227 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ACKR4Q9NPB9 350 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 C1orf196B1AJZ1 125 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 EIF4E2O60573 245 aaKnown RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 IGHG1P01857 330 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 C3orf33Q6P1S2 294 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 DCXRQ7Z4W1 244 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 OR4C3Q8NH37 302 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 NAA11Q9BSU3 229 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 TMEM59Q9BXS4 323 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ZFP57Q9NU63 452 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RARRES3Q9UL19 164 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 TRAPPC6AO75865 159 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RGS11O94810 467 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 NDUFB6O95139 128 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 TAS2R4Q9NYW5 299 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ING1Q9UK53 422 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 A0A0B4J2A0 478 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 LANCL1O43813 399 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 KCNG3Q8TAE7 436 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 MARC2Q969Z3 335 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF681Q96N22 645 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 HHIPQ96QV1 700 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 MICU1Q9BPX6 476 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 VSX1Q9NZR4 365 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 SHPKQ9UHJ6 478 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 KCNG2Q9UJ96 466 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 EDARQ9UNE0 448 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 PRAMEF27A3QJZ7 478 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR6C68A6NDL8 312 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 HSPB2A8KAH6 182 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 CCSO14618 274 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 DUSP2Q05923 314 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 PMPCAQ10713 525 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF169Q14929 603 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 RHEBQ15382 184 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 HSPB2Q16082 182 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 PLA1AQ53H76 456 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ACTBL2Q562R1 376 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 CD200R1LQ6Q8B3 271 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 PRSS41Q7RTY9 318 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ABI3BPQ7Z7G0 1075 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR4D9Q8NGE8 314 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ELSPBP1Q96BH3 223 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 PBDC1Q9BVG4 233 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 SRPK3Q9UPE1 567 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR5H14A6NHG9 310 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 SULT2B1O00204 365 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 MOSPD3O75425 235 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 CCNOP22674 350 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 DLX2Q07687 328 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 CDONQ4KMG0 1287 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 GRINAQ7Z429 371 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 SCMH1Q96GD3 660 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 EHFQ9NZC4 300 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 TMEM235A6NFC5 223 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 TLCD2A6NGC4 264 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR2F2O95006 317 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR2F1Q13607 317 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ELFN2Q5R3F8 820 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 C19orf48Q6RUI8 117 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 MAMSTRQ6ZN01 415 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 LRRC69Q6ZNQ3 347 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 SFTPA1Q8IWL2 248 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR56B1Q8NGI3 324 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 RNF141Q8WVD5 230 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF442Q9H7R0 627 aa13.42□□□□□ -0.26
TCOF1-201ENST00000323668 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
TCOF1-201ENST00000323668 OR8U9P0C7N5 309 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 GNRHRP30968 328 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 SLC17A1Q14916 467 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 PRICKLE4Q2TBC4 344 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 RHOUQ7L0Q8 258 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 OR5M1Q8NGP8 315 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 ATPIF1Q9UII2 106 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 OGG1O15527 345 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 OR4E1P0C645 316 aa13.41□□□□□ -0.26
TCOF1-201ENST00000323668 ACHEP22303 614 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms