RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 AKR1C2P52895 323 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 CTXN1P60606 82 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 SORDQ00796 357 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 AKR1C1Q04828 323 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 TRAM1Q15629 374 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 LRRN1Q6UXK5 716 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 LURAP1LQ8IV03 231 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 OR5T2Q8NGG2 359 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 FSCN3Q9NQT6 498 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 PRDM9Q9NQV7 894 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC2A4RGQ9NR83 387 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 PRSS44E7EML9 344 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 NDUFB6O95139 128 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 CDKN2AP42771 156 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 SOX2P48431 317 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 P2RX1P51575 399 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 POLR2GP62487 172 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 LGALS3BPQ08380 585 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 RIPPLY1Q0D2K3 151 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 FUT7Q11130 342 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF141Q15928 474 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC6A19Q695T7 634 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 LANCL3Q6ZV70 420 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC36A1Q7Z2H8 476 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 FCAMRQ8WWV6 532 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF426Q9BUY5 554 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 PHF7Q9BWX1 381 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 MFFQ9GZY8 342 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 DNTTIP1Q9H147 329 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 POLE3Q9NRF9 147 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 SDK2Q58EX2 2172 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 TMEM272A0A1B0GTI8 110 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 NPIPB9F8W1W9 429 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 DCTN6O00399 190 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 PIN1P1O15428 100 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 CDC40O60508 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 ATG12O94817 140 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 DCNP07585 359 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 TACR3P29371 465 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 HSD17B7P56937 341 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 CBLN2Q8IUK8 224 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 OR1L3Q8NH93 324 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 GPR27Q9NS67 375 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 ATXN7L1Q9ULK2 861 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 PI4KAP42356 2102 aa14.07□□□□□ -0.16
SHROOM1-201ENST00000319854 IGKV1D-42A0A075B6H8 117 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 A0A1W2PR77 199 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 LINC00587B1AMM8 73 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 RAD1O60671 282 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF254O75437 659 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ECDO95905 644 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 IGLV3-19P01714 112 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 TMIGD3P0DMS9 266 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 SPI1P17947 270 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 DPP4P27487 766 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 DLX5P56178 289 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC37A1P57057 533 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 HNRNPKP61978 463 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 TSSK4Q6SA08 328 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 MUC20Q8N307 709 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 OR4D10Q8NGI6 311 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC2A12Q8TD20 617 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ZDHHC12Q96GR4 267 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 NKX3-1Q99801 234 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 GPN1Q9HCN4 374 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 UBQLN4Q9NRR5 601 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 TAS2R10Q9NYW0 307 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 CTSFQ9UBX1 484 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 KCNK7Q9Y2U2 307 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 TMEM72A0PK05 275 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 SNRPGP15A8MWD9 76 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF749O43361 778 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 IL5P05113 134 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 OR8G3PP0DMU2 310 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 PLA2G7Q13093 441 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 IL10RAQ13651 578 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ARHGAP40Q5TG30 622 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 BAIAP2L2Q6UXY1 529 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 JAZF1Q86VZ6 243 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 LDLRAD3Q86YD5 345 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 NPEPL1Q8NDH3 523 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 NUDT22Q9BRQ3 303 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 TSPAN10Q9H1Z9 355 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 UBE2ZQ9H832 354 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 NOX4Q9NPH5 578 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 GTF2A1LQ9UNN4 478 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 NCOR1O75376 2440 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 NAP1L6A6NFF2 107 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 PRR32B1ATL7 298 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 GABRA4P48169 554 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 MEOX2P50222 304 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ART1P52961 327 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 CFHR1Q03591 330 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 CBFBQ13951 182 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 GUCA2BQ16661 112 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 C14orf28Q4W4Y0 310 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 HLA-DQA1Q5Y7H0 255 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 PUSL1Q8N0Z8 303 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 KDM8Q8N371 416 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 OR6K3Q8NGY3 331 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms