RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 LIMS3P0CW19 117 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 LIMS4P0CW20 117 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 RPS19BP1Q86WX3 136 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CISD2Q8N5K1 135 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 TCTEX1D1Q8N7M0 179 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 APOOQ9BUR5 198 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CHST8Q9H2A9 424 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 KCND3Q9UK17 655 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 OR52A1Q9UKL2 312 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 NDRG2Q9UN36 371 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1B0GVT2 93 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 MCRIP1C9JLW8 97 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 MAS1P04201 325 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 NPPBP16860 134 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 ABCD3P28288 659 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 LUMP51884 338 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CDK5R1Q15078 307 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 RPE65Q16518 533 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 SOWAHCQ53LP3 525 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM65Q6PI78 240 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 LHFPL2Q6ZUX7 228 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 PAQR9Q6ZVX9 377 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 SMIM15Q7Z3B0 74 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CNIH4Q9P003 139 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 AK6Q9Y3D8 172 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 PLXNA4Q9HCM2 1894 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 FAM183AA6NL82 134 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 M0R3H8 397 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CTDSP2O14595 271 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 STK17BO94768 372 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 APLNRP35414 380 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CHAF1BQ13112 559 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 DVL3Q92997 716 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CACNA1HO95180 2353 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 TAPBPO15533 448 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 FNTBP49356 437 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 OR8G1Q15617 311 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CLLU1OSQ5K130 101 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 XAF1Q6GPH4 301 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 SLC38A6Q8IZM9 456 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 OR9K2Q8NGE7 335 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 LURAP1Q96LR2 239 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 SSX3Q99909 188 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 GLIPR2Q9H4G4 154 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 PTGDR2Q9Y5Y4 395 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 V9GYS6 101 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 TOXO94900 526 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 GLDNQ6ZMI3 551 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 GRAMD2AQ8IUY3 354 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 PRSS58Q8IYP2 241 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CXorf65A6NEN9 183 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LILRA5A6NI73 299 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 XRCC2O43543 280 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 RRASP10301 218 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PTPN6P29350 595 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HTR6P50406 440 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 H1FNTQ75WM6 255 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 FCRLAQ7L513 359 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 GCDHQ92947 438 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TSLPQ969D9 159 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 MRGPRX4Q96LA9 322 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 AMBRA1Q9C0C7 1298 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 C20orf27Q9GZN8 174 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ENKD1Q9H0I2 346 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 MMP28Q9H239 520 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TXNIPQ9H3M7 391 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 DLL4Q9NR61 685 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HEMK1Q9Y5R4 338 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 HIDE1A8MVS5 230 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF587BE7ETH6 402 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 PPP5D1E7EU14 171 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TRAPPC2LH3BP13 241 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 EPXP11678 715 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 UBE2NP61088 152 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LSRQ86X29 649 aaPredicted RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 EDARADDQ8WWZ3 215 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TAF9BQ9HBM6 251 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TAAR2Q9P1P5 351 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 NCDNQ9UBB6 729 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 VDAC3Q9Y277 283 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 C17orf105B2RV13 164 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 SLC17A2O00624 439 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 B4GAT1O43505 415 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TRNP1Q6NT89 227 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 LANCL3Q6ZV70 420 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 MRPL21Q7Z2W9 205 aaKnown RBP8.1□□□□□ -1.11
COL6A5-202ENST00000312481 TM4SF18Q96CE8 201 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 ZPBPQ9BS86 351 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 MIR1-1HGQ9H1L0 117 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 EHFQ9NZC4 300 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 GABRQQ9UN88 632 aa8.1□□□□□ -1.11
COL6A5-202ENST00000312481 NPIPB13A6NJU9 1138 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms