RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TLN2Q9Y4G6 2542 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PHF3Q92576 2039 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 RTTNQ86VV8 2226 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 A0A0G2JMP0 313 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 LINC00854A0A1B0GVQ3 168 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1W2PR48 441 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 TRAPPC13A5PLN9 417 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NAP1L6A6NFF2 107 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 UNC119BA6NIH7 251 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C12orf71A8MTZ7 269 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ISM1B1AKI9 464 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SULT1B1O43704 296 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CHP2O43745 196 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 GPRIN2O60269 458 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 LCMT2O60294 686 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 GATBO75879 557 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ARL6IP5O75915 188 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SLC22A5O76082 557 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 UBL3O95164 117 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CRYZL1O95825 349 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 IFNA7P01567 189 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 RAF1P04049 648 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 DBIP07108 87 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 TPOP07202 933 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 RPS4Y1P22090 263 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OTX2P32243 289 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ATP6V1E1P36543 226 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CTBP2P56545 445 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NRG3P56975 720 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SOX8P57073 446 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 RGS8P57771 180 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 STXBP1P61764 594 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 MRPS10P82664 201 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HSF2Q03933 536 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 Q0VFX4 171 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 BAMBIQ13145 260 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 LASP1Q14847 261 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 MAPK14Q16539 360 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NTRK2Q16620 822 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 DEFB110Q30KQ9 67 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 BTBD16Q32M84 506 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ARHGAP11BQ3KRB8 267 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 TMEM177Q53S58 311 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 DCAF10Q5QP82 559 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 FAM69AQ5T7M9 428 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C1orf189Q5VU69 101 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 GARNL3Q5VVW2 1013 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF57Q68EA5 555 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NIPAL3Q6P499 406 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF793Q6ZN11 406 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 FRRS1Q6ZNA5 592 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 MED25Q71SY5 747 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 BTN2A1Q7KYR7 527 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OVCH1Q7RTY7 1134 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C16orf62Q7Z3J2 963 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 GDF7Q7Z4P5 450 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 LHFPL3Q86UP9 236 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 RANBP3LQ86VV4 465 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CPOQ8IVL8 374 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 MCEMP1Q8IX19 187 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CDK20Q8IZL9 346 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CMTM4Q8IZR5 234 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SYS1Q8N2H4 156 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CADM2Q8N3J6 435 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 GALNT16Q8N428 558 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ACOT4Q8N9L9 421 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 MFSD9Q8NBP5 474 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ST6GALNAC3Q8NDV1 305 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 BEND2Q8NDZ0 799 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR4F15Q8NGB8 312 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR4E2Q8NGC2 313 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR52L1Q8NGH7 329 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR5D16Q8NGK9 328 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR4Q3Q8NH05 313 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR8K5Q8NH50 307 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OR5W2Q8NH69 310 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SUN5Q8TC36 379 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HAVCR2Q8TDQ0 301 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ADAMTS15Q8TE58 950 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 GRHL3Q8TE85 626 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C15orf40Q8WUR7 153 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SPRYD4Q8WW59 207 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CNRIP1Q96F85 164 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C12orf66Q96MD2 445 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF681Q96N22 645 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 MS4A4EQ96PG1 132 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 WACQ9BTA9 647 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NDC1Q9BTX1 674 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 TMED9Q9BVK6 235 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ACAT2Q9BWD1 397 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SPRTNQ9H040 489 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HDHD2Q9H0R4 259 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ABCG5Q9H222 651 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 KIR3DX1Q9H7L2 352 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HINT3Q9NQE9 182 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 IMP3Q9NV31 184 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C14orf105Q9NVL8 296 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 P4HTMQ9NXG6 502 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms