RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 OR10K2Q6IF99 312 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 C1orf94Q6P1W5 598 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 FAM220AQ7Z4H9 259 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 MUC20Q8N307 709 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR10H5Q8NGA6 315 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR51S1Q8NGJ8 323 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 IFI44Q8TCB0 444 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 CHST8Q9H2A9 424 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 TAS2R8Q9NYW2 309 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 DHCR7Q9UBM7 475 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 FAM96BQ9Y3D0 163 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 TP53BP1Q12888 1972 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 ARID1BQ8NFD5 2236 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 TRAV18A0A075B6X5 111 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 RFPL4AA6NLU0 287 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 KDM4EB2RXH2 506 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 RFPL4AL1F8VTS6 287 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 TMPRSS11DO60235 418 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 NDUFB6O95139 128 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 MAPK3P27361 379 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 NRG3P56975 720 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 PCBP3P57721 371 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 PPIAP62937 165 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 SPEM2Q0P670 501 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 ALKBH1Q13686 389 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 NCMAPQ5T1S8 102 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 HLA-DQA1Q5Y7H0 255 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 ZNF627Q7L945 461 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 NR2C2APQ86WQ0 139 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 GLB1L2Q8IW92 636 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR7G2Q8NG99 324 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR51A7Q8NH64 312 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 DCUN1D4Q92564 292 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 TMEM41AQ96HV5 264 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 S100A13Q99584 98 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 TLNRD1Q9H1K6 362 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 ADAM29Q9UKF5 820 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 ATG4BQ9Y4P1 393 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 KIAA1549LQ6ZVL6 1849 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 PLXNA2O75051 1894 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 GXYLT2A0PJZ3 443 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 PHYHO14832 338 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 AMY2AP04746 511 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 RPA2P15927 270 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 RPL4P36578 427 aaKnown RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 GPR3P46089 330 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 ZNF155Q12901 538 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 ZNF528Q3MIS6 628 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 CDNFQ49AH0 187 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 OR52W1Q6IF63 320 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 C3orf33Q6P1S2 294 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 MAMSTRQ6ZN01 415 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 NDUFAF7Q7L592 441 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 DVL3Q92997 716 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 SPSB2Q99619 263 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 SULT4A1Q9BR01 284 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 EDEM2Q9BV94 578 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 SARGQ9BW04 601 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 TMPRSS5Q9H3S3 457 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 FAM60AQ9NP50 221 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 PRTFDC1Q9NRG1 225 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 A4GNTQ9UNA3 340 aa9.93□□□□□ -0.82
LSM3-201ENST00000306024 SIRT4Q9Y6E7 314 aaPredicted RBP9.93□□□□□ -0.82
LSM3-201ENST00000306024 TMEM229AB2RXF0 380 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 MAGEB4O15481 346 aaPredicted RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR2F2O95006 317 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 AIFM1O95831 613 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ITPKBP27987 946 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 RPS10P46783 165 aaKnown RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR2F1Q13607 317 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ZNHIT3Q15649 155 aaPredicted RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 YOD1Q5VVQ6 348 aaPredicted RBP9.92□□□□□ -0.82
LSM3-201ENST00000306024 DCAF12L2Q5VW00 463 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR7E24Q6IFN5 339 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ST7LQ8TDW4 575 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 TM4SF18Q96CE8 201 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PTCHD1Q96NR3 888 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 GPA33Q99795 319 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 C20orf24Q9BUV8 137 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 DPH1Q9BZG8 443 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 SDHAF3Q9NRP4 125 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 IKZF2Q9UKS7 526 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PCDHGA5Q9Y5G8 931 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 V9GY05 133 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 GVINP1Q7Z2Y8 2422 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PSMD9O00233 223 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 BCL2L11O43521 198 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR2T1O43869 369 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 JMJD7P0C870 316 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 AKAIN1P0CW23 69 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 OR1D4P47884 311 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 PON3Q15166 354 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ODF4Q2M2E3 257 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ACER2Q5QJU3 275 aa9.92□□□□□ -0.82
LSM3-201ENST00000306024 ELFN2Q5R3F8 820 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 493.3 ms