RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MOKQ9UQ07 419 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 TVP23AA6NH52 213 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 ZNF587BE7ETH6 402 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 SEC14L2O76054 403 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 CNOT4O95628 575 aaKnown RBP19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 GAAP10253 952 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 MEP1BQ16820 701 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 SLC35D3Q5M8T2 416 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 GID4Q8IVV7 300 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 GLB1L2Q8IW92 636 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 BPIFB6Q8NFQ5 453 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 NABP1Q96AH0 204 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 WDR76Q9H967 626 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 B3GAT2Q9NPZ5 323 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 LRCH1Q9Y2L9 728 aa19.17■□□□□ 0.66
PDLIM3-203ENST00000284771 SH3D21A4FU49 640 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 ZNF99A8MXY4 864 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 MSTNO14793 375 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 DBTP11182 482 aaKnown RBP19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 PSKH1P11801 424 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 LAP3P28838 519 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 SLC15A1P46059 708 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 CENPAP49450 140 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 GLO1Q04760 184 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 ZNF91Q05481 1191 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 DNM1P34Q6PK57 102 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 FOXL2NBQ6ZUU3 175 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 SLC26A10Q8NG04 563 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 SMAP2Q8WU79 429 aaPredicted RBP19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 RFKQ969G6 155 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 FOXB1Q99853 325 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 SEC61A2Q9H9S3 476 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 HAO2Q9NYQ3 351 aa19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDLIM3-203ENST00000284771 A0A1W2PPL8 197 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 SLC22A31A6NKX4 558 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 SLC1A7O00341 560 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 DVL2O14641 736 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 APOL3O95236 402 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 MPGP29372 298 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 CXCR4P61073 352 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 ARF1P84077 181 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 HSF2Q03933 536 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 UGT2A3Q6UWM9 527 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 PIGMQ9H3S5 423 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 PLCXD1Q9NUJ7 323 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 TMEM38BQ9NVV0 291 aa19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 WARS2Q9UGM6 360 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 ERRFI1Q9UJM3 462 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-203ENST00000284771 ADRA2AP08913 450 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 RPS27P42677 84 aaKnown RBP19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 MTNR1AP48039 350 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 TSC22D1Q15714 1073 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 BEND4Q6ZU67 534 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 TIGD4Q8IY51 512 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 ZNF786Q8N393 782 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 SGCDQ92629 289 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 GGHQ92820 318 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 NELFAQ9H3P2 528 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 MARCH7Q9H992 704 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 ADGRL4Q9HBW9 690 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 POLE4Q9NR33 117 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 COMMD3-BMI1R4GMX3 469 aa19.14■□□□□ 0.66
PDLIM3-203ENST00000284771 CACNA1CQ13936 2221 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 EEF1E1-BLOC1S5C9J1V9 151 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 EEF1E1O43324 174 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 SELENOFO60613 162 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 LYZL6O75951 148 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 MRPL3P09001 348 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 B4GALT1P15291 398 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 COX5AP20674 150 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF84P51523 738 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 MRPS34P82930 218 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 GGTLC2Q14390 218 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF627Q7L945 461 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 SHFQ7M4L6 423 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 MRGPRGQ86SM5 289 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 ZNF433Q8N7K0 673 aaPredicted RBP19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 OR4F15Q8NGB8 312 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 OR51G2Q8NGK0 314 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 C11orf40Q8WZ69 217 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 LGALS12Q96DT0 336 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 RNFT2Q96EX2 444 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 EMC7Q9NPA0 242 aa19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 PAK1IP1Q9NWT1 392 aaPredicted RBP19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 RPL36Q9Y3U8 105 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-203ENST00000284771 FLNCQ14315 2725 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 PRR14LQ5THK1 2151 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 HLA-DQA2P01906 255 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 CRHBPP24387 322 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 CHRNB4P30926 498 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 HCCSP53701 268 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 MVKQ03426 396 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 STK11Q15831 433 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 ABHD12BQ7Z5M8 362 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 CXorf67Q86X51 503 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 MRPS18AQ9NVS2 196 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 TAS2R16Q9NYV7 291 aa19.13■□□□□ 0.65
PDLIM3-203ENST00000284771 PSORS1C1Q9UIG5 152 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms