RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 C12orf54Q6X4T0 127 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ACOT7LQ6ZUV0 252 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 HOGA1Q86XE5 327 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 OR4N5Q8IXE1 308 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 C15orf54Q8N8G6 183 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 FAM45AQ8TCE6 357 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CREB3L1Q96BA8 519 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 C12orf42Q96LP6 360 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 LAT2Q9GZY6 243 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ADGRL4Q9HBW9 690 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ELF5Q9UKW6 265 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 IGLV5-37A0A075B6J1 123 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 IGHV4OR15-8A0A075B7B6 117 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 A0A1B0GUS0 222 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 A0A1W2PP11 408 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 E5RI56 91 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 IDH3BO43837 385 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CHST1O43916 411 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CTSVO60911 334 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SRP72O76094 671 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 CALB1P05937 261 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 FGF5P12034 268 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RAB4AP20338 218 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RPA3P35244 121 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 AQP2P41181 271 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 UCNP55089 124 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PAX2Q02962 417 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ILF3Q12906 894 aaKnown RBP eCLIP2.38□□□□□ -2.038e-10■■■■■ 33.1
CHD1-201ENST00000284049 ABRAXAS2Q15018 415 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZIC1Q15915 447 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PRSS48Q7RTY5 328 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SLC47A2Q86VL8 602 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SLC26A11Q86WA9 606 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 OR2T6Q8NHC8 308 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 OLIG1Q8TAK6 271 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 BIRC7Q96CA5 298 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SYT15Q9BQS2 421 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PARVBQ9HBI1 364 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SMOXQ9NWM0 555 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SLX4Q8IY92 1834 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RAD50Q92878 1312 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 MYH13Q9UKX3 1938 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 IGHV4-4A0A075B6R2 117 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 KBTBD11-OT1A0A1B0GTJ5 212 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 IGLON5A6NGN9 336 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ANHXE9PGG2 379 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RGS14O43566 566 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SCN2BO60939 215 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 NDUFS6O75380 124 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 HMGN1P05114 100 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 G0S2P27469 103 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 OMPP47874 163 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RIDAP52758 137 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 EFEMP1Q12805 493 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TMEM31Q5JXX7 168 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 FAM92BQ6ZTR7 304 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 C10orf107Q8IVU9 208 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 BOD1L2Q8IYS8 172 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 OR5AK3PQ8NH89 298 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 RCN3Q96D15 328 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ECSITQ9BQ95 431 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TMEM121Q9BTD3 319 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CALN1Q9BXU9 219 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 C1orf198Q9H425 327 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CLN8Q9UBY8 286 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 LRRC37A2A6NM11 1700 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 INAFM1C9JVW0 142 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 DCTN6O00399 190 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 H2AFZP0C0S5 128 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 MED14OSP0DP75 135 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 GLRA1P23415 457 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 COMPP49747 757 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 PAX9P55771 341 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 TRAM2Q15035 370 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 EOGTQ5NDL2 527 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZNF658Q5TYW1 1059 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 ITIH5Q86UX2 942 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 DND1Q8IYX4 353 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 FGFRL1Q8N441 504 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 CSNK1A1LQ8N752 337 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SPPL2AQ8TCT8 520 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 DDB2Q92466 427 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZNF707Q96C28 371 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 SCMH1Q96GD3 660 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 SORT1Q99523 831 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 ZFP64Q9NPA5 681 aa2.38□□□□□ -2.03
CHD1-201ENST00000284049 PAK1IP1Q9NWT1 392 aaPredicted RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 CCDC59Q9P031 241 aaKnown RBP2.38□□□□□ -2.03
CHD1-201ENST00000284049 MEIOCA2RUB1 952 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 SLC16A4O15374 487 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 OR5F1O95221 314 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TUFMP49411 452 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 SELENBP1Q13228 472 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 KIAA0141Q14154 515 aaPredicted RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 BCL2A1Q16548 175 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 RWDD4Q6NW29 188 aaKnown RBP2.37□□□□□ -2.03
CHD1-201ENST00000284049 GFRALQ6UXV0 394 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 BAIAP2L2Q6UXY1 529 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 TMEM150AQ86TG1 271 aa2.37□□□□□ -2.03
CHD1-201ENST00000284049 RALGPS2Q86X27 583 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms