RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SDC1P18827 310 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 LIPIQ6XZB0 460 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 PPP1R3BQ86XI6 285 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 NEIL2Q969S2 332 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 SLC46A1Q96NT5 459 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 NXPH3O95157 252 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 ATP1B1P05026 303 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 CSF3P09919 207 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 DPY19L2P2Q6ZN68 376 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF485Q8NCK3 441 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 SLC22A12Q96S37 553 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 DICER1Q9UPY3 1922 aaKnown RBP8.07□□□□□ -1.12
NIPBL-201ENST00000282516 ACOD1A6NK06 481 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 FAM72CH0Y354 149 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 FABP7O15540 132 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 HNF1AP20823 631 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 PPP1CBP62140 327 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 FAM72AQ5TYM5 149 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 FAM72DQ6L9T8 149 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 ADIPOR2Q86V24 386 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 FAM72BQ86X60 149 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 GABARAPL1Q9H0R8 117 aa8.07□□□□□ -1.12
NIPBL-201ENST00000282516 SHPRHQ149N8 1683 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TCRBV3S1A0A5B6 114 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 C21orf33P30042 268 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ERHP84090 104 aaKnown RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TSPAN31Q12999 210 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 OR8G1Q15617 311 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GLYATL3Q5SZD4 288 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 RETREG3Q86VR2 466 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TVP23CQ96ET8 276 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TECTBQ96PL2 329 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 STACQ99469 402 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 WDR61Q9GZS3 305 aaKnown RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ACOXLQ9NUZ1 547 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 A0A0A6YYC8 382 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TRBV4-1A0A0J9YWV2 114 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 I3L1I5 382 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 PLSCR1O15162 318 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 EMP3P54852 163 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 FABP9Q0Z7S8 132 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 IQCJQ1A5X6 159 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ADAM5Q6NVV9 412 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 CBARPQ8N350 705 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 MFSD9Q8NBP5 474 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GJC3Q8NFK1 279 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 RHOXF1Q8NHV9 184 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GHSRQ92847 366 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TAS2R5Q9NYW4 299 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ANKRD31Q8N7Z5 1873 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 SCN9AQ15858 1988 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 PI4KAP42356 2102 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF727A8MUV8 499 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ST8SIA3O43173 380 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 KRTDAPP60985 99 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF154Q13106 437 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 PLXDC2Q6UX71 529 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TMEM178AQ8NBL3 297 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 OR2T6Q8NHC8 308 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 SLC25A32Q9H2D1 315 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 LAMP3Q9UQV4 416 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GPR55Q9Y2T6 319 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 COL14A1Q05707 1796 aaKnown RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 E5RGE8 158 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 M0QYG6 137 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 DOK2O60496 412 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 OR2J3O76001 311 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GPR75O95800 540 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 MAP2K6P52564 334 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 SHISA6Q6ZSJ9 500 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 MBOAT2Q6ZWT7 520 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ISCA2Q86U28 154 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 PNPLA1Q8N8W4 532 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 CLMPQ9H6B4 373 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 GAREM1Q9H706 876 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 STARD5Q9NSY2 213 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF142P52746 1687 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 IGKV6D-41A0A0C4DH26 115 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 FAM24AA6NFZ4 105 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 AQP7P3A6NL99 342 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 G3V2L1 256 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 FGF4P08620 206 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 EDN3P14138 238 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 NKX2-1P43699 371 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ARSDP51689 593 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 BTG1P62324 171 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 KCNJ10P78508 379 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF813Q6ZN06 617 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 TMEM182Q6ZP80 229 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-201ENST00000282516 NECAP1Q8NC96 275 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 NKX2-4Q9H2Z4 354 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 SCN1AP35498 2009 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 NME2P1O60361 137 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ORM1P02763 201 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 CARD18P57730 90 aa8.06□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF280AP59817 542 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms