RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ANKRD9Q96BM1 317 aaPredicted RBP11.75□□□□□ -0.53
SNX1-201ENST00000261889 OR2M4Q96R27 311 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 INPP5EQ9NRR6 644 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 MLXQ9UH92 298 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 PLCL2Q9UPR0 1127 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 TMED7Q9Y3B3 224 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 IGKV1D-42A0A075B6H8 117 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 SULT1C2O00338 296 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 CYR61O00622 381 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 CDC40O60508 579 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■■ 31.7
SNX1-201ENST00000261889 GALP22466 123 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 BDKRB2P30411 391 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 GDI1P31150 447 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 TRAM1Q15629 374 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 ASPHD2Q6ICH7 369 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 CLEC9AQ6UXN8 241 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 USP53Q70EK8 1073 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 FAM3DQ96BQ1 224 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 SERINC2Q96SA4 455 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 ADOQ96SZ5 270 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 LPAR4Q99677 370 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 OR11A1Q9GZK7 315 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 APMAPQ9HDC9 416 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 SLC22A11Q9NSA0 550 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 TMEM82A0PJX8 343 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 OR5H14A6NHG9 310 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 HNRNPA1P09651 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX1-201ENST00000261889 PRSS3P35030 304 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 RPL18Q07020 188 aaKnown RBP11.75□□□□□ -0.53
SNX1-201ENST00000261889 PLEKHN1Q494U1 663 aaPredicted RBP11.75□□□□□ -0.53
SNX1-201ENST00000261889 CDNFQ49AH0 187 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 MESTQ5EB52 335 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 OLFML2AQ68BL7 652 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 OR2W3Q7Z3T1 314 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 PUSL1Q8N0Z8 303 aaKnown RBP11.75□□□□□ -0.53
SNX1-201ENST00000261889 FAM71CQ8NEG0 241 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 WFIKKN2Q8TEU8 576 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 JAM3Q9BX67 310 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 OR8D2Q9GZM6 311 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 GRHPRQ9UBQ7 328 aa11.75□□□□□ -0.53
SNX1-201ENST00000261889 MYO7BQ6PIF6 2116 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 LOC400499M0QZD8 3231 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 MPTX1A8MV57 137 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 OR2A4O95047 310 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 DLSTP36957 453 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 RPS15AP62244 130 aaKnown RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 CLVS2Q5SYC1 327 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 PRAMEF8Q5VWM4 474 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 PRAMEF7Q5VXH5 474 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 ULK3Q6PHR2 472 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 ZNF227Q86WZ6 799 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 SLC35F3Q8IY50 421 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 OR10R2Q8NGX6 335 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 C16orf52Q8NHV5 167 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 THAP3Q8WTV1 239 aaPredicted RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 OR2A7Q96R45 310 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 ZFYVE21Q9BQ24 234 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 SELENOIQ9C0D9 397 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 PNO1Q9NRX1 252 aaKnown RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 ICAM5Q9UMF0 924 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 SLC27A6Q9Y2P4 619 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 SPACA6W5XKT8 324 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 C5orf51A6NDU8 294 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 H7C417 338 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 PRAMEF2O60811 474 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 PRAF2O60831 178 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 COL9A1P20849 921 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 GRK6P43250 576 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 DHRS2Q13268 280 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 MANEAQ5SRI9 462 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 GABRG1Q8N1C3 465 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 C12orf45Q8N5I9 185 aaPredicted RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 OR2I1PQ8NGU4 316 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 NKX6-2Q9C056 277 aaPredicted RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 LDAHQ9H6V9 325 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 CENPMQ9NSP4 180 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 MRPS18BQ9Y676 258 aaKnown RBP11.74□□□□□ -0.53
SNX1-201ENST00000261889 COLEC10Q9Y6Z7 277 aa11.74□□□□□ -0.53
SNX1-201ENST00000261889 K7EQS6 105 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 TO15178 435 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 HPP00738 406 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 SLC2A1P11166 492 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 FMODQ06828 376 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 PDSS1Q5T2R2 415 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 ADAD2Q8NCV1 583 aaKnown RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 NAXEQ8NCW5 288 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 ZC3H10Q96K80 434 aaKnown RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 DUSP22Q9NRW4 184 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 OR4C45A6NMZ5 311 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 OR2AT4A6NND4 320 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 SLC16A7O60669 478 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 GLI4P10075 376 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms