RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 SIGLEC5O15389 551 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 CDC40O60508 579 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■□□□□ 8.5
SCARB1-201ENST00000261693 GMFBP60983 142 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 TOMM34Q15785 309 aaPredicted RBP17.48■□□□□ 0.39
SCARB1-201ENST00000261693 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 ZNF454Q8N9F8 522 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 CLEC1AQ8NC01 280 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 OTOSQ8NHW6 89 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 MAP3K3Q99759 626 aa17.48■□□□□ 0.39
SCARB1-201ENST00000261693 KIR2DS5A0A0G2JLQ3 304 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 A0A0G2JNG1 304 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 LOC100289279A0A1B0GTE1 492 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 CDC14CA4D256 554 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 KIR2DS3K7RE56 304 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 WNT11O96014 354 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 MAOBP27338 520 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 CTHP32929 405 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 YPEL5P62699 121 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 KIR2DS5Q14953 304 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 MDGA2Q7Z553 956 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 PDZD9Q8IXQ8 264 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 GABRG1Q8N1C3 465 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 BVESQ8NE79 360 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 TMEM14AQ9Y6G1 99 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 PRUNE2Q8WUY3 3088 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 KRBOX1C9JBD0 128 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 SRPX2O60687 465 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-201ENST00000261693 SPARCP09486 303 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 ETFDHQ16134 617 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 CHRDL2Q6WN34 429 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 CFAP77Q6ZQR2 320 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 OVCH2Q7RTZ1 564 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 NAXDQ8IW45 347 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 FAM160A2Q8N612 972 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-201ENST00000261693 FBRSQ9HAH7 460 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 MED9Q9NWA0 146 aa17.47■□□□□ 0.39
SCARB1-201ENST00000261693 ATP6V1G2-DDX39BF2Z307 99 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 FGF2P09038 288 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 CTSEP14091 401 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 EIF2B5Q13144 721 aaKnown RBP17.46■□□□□ 0.39
SCARB1-201ENST00000261693 EMC4Q5J8M3 183 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 CDH26Q8IXH8 852 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 GALNT16Q8N428 558 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 OR1J4Q8NGS1 313 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 OR8D2Q9GZM6 311 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 TINAGL1Q9GZM7 467 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-201ENST00000261693 NRSN2Q9GZP1 204 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 CGGBP1Q9UFW8 167 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-201ENST00000261693 SLC17A2O00624 439 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 XKRYO14609 159 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 HCRTR2O43614 444 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 SNAPC5O75971 98 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 CALCRP30988 508 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 SCAND1P57086 179 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 MFGE8Q08431 387 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-201ENST00000261693 SQSTM1Q13501 440 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 ZMYND11Q15326 602 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 FAM74A1Q5RGS3 127 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 NDUFAF7Q7L592 441 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 OR5M9Q8NGP3 310 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 GAL3ST4Q96RP7 486 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 DPYSL5Q9BPU6 564 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 PRODH2Q9UF12 536 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 GMEB2Q9UKD1 530 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 FBXO4Q9UKT5 387 aa17.46■□□□□ 0.39
SCARB1-201ENST00000261693 TCRBV21S2A2A0A5A6 115 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 SDC3O75056 442 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 NUDT14O95848 222 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 CSN2P05814 226 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 OR4E1P0C645 316 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 ACHEP22303 614 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 SLC17A1Q14916 467 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 UBXN2BQ14CS0 331 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 GLYATL3Q5SZD4 288 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 C17orf107Q6ZR85 190 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 OR8B4Q96RC9 309 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 ZC4H2Q9NQZ6 224 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 FARSAQ9Y285 508 aaKnown RBP17.45■□□□□ 0.38
SCARB1-201ENST00000261693 SLC16A7O60669 478 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 ICOSLGO75144 302 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 RAB3DO95716 219 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 LIPCP11150 499 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 CTRB1P17538 263 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 PBX2P40425 430 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 FNTBP49356 437 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 CTRB2Q6GPI1 263 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 OR10K2Q6IF99 312 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 GPX8Q8TED1 209 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 SEH1LQ96EE3 360 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 DZANK1Q9NVP4 752 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 TAS2R4Q9NYW5 299 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 DHDHQ9UQ10 334 aa17.45■□□□□ 0.38
SCARB1-201ENST00000261693 THADAQ6YHU6 1953 aa17.44■□□□□ 0.38
SCARB1-201ENST00000261693 PCDH15Q96QU1 1955 aa17.44■□□□□ 0.38
SCARB1-201ENST00000261693 TRAV14DV4A0A0A6YYC5 116 aa17.44■□□□□ 0.38
SCARB1-201ENST00000261693 TMEM82A0PJX8 343 aa17.44■□□□□ 0.38
SCARB1-201ENST00000261693 DCDC2BA2VCK2 349 aa17.44■□□□□ 0.38
SCARB1-201ENST00000261693 TSPAN9O75954 239 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms