RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 S1PR3Q99500 378 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 TCRBV3S1A0A5B6 114 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 APEHP13798 732 aaKnown RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 KLF3P57682 345 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 MDGA2Q7Z553 956 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 GTPBP8Q8N3Z3 284 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 OR52N1Q8NH53 320 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 RNF170Q96K19 258 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 QRSL1Q9H0R6 528 aaKnown RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 TSPAN10Q9H1Z9 355 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 SYT4Q9H2B2 425 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 LIN7BQ9HAP6 207 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 NUDT15Q9NV35 164 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 MGAT4CQ9UBM8 478 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 TCRBV16S1A1N1A0A5B0 115 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 PRR35P0CG20 571 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 ADH7P40394 386 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 ZXDBP98169 803 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 HNRNPA0Q13151 305 aaKnown RBP12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 OR6V1Q8N148 313 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 TMEM203Q969S6 136 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 SFXN3Q9BWM7 321 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 SPICQ8N5J4 248 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 OR6M1Q8NGM8 313 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 OR51B6Q9H340 312 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF354AO60765 605 aaPredicted RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PRAF2O60831 178 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SEC14L2O76054 403 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PMS2P2O95744 297 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 NDUFB7P17568 137 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 THBS3P49746 956 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 TP53I3Q53FA7 332 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 CD276Q5ZPR3 534 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 GSG1LQ6UXU4 331 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OR6K3Q8NGY3 331 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ATF6BQ99941 703 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 A4GNTQ9UNA3 340 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF816-ZNF321PA0A0X1KG74 233 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SCGB1D2O95969 90 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 CCL4P13236 92 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 S100A10P60903 97 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ALKBH1Q13686 389 aaKnown RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 LIPKQ5VXJ0 399 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SNX29P2Q8IUI4 249 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 RDH10Q8IZV5 341 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 EDARADDQ8WWZ3 215 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 WNT2BQ93097 391 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF224Q9NZL3 707 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 hCG_2014768A0A024R1R8 64 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 M0R135 149 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 FRS3O43559 492 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SNU13P55769 128 aaKnown RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 WIPI1Q5MNZ9 446 aaPredicted RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OGFRL1Q5TC84 451 aaPredicted RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 DRAM2Q6UX65 266 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 BORCS7Q96B45 105 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF799Q96GE5 643 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 KIRREL1Q96J84 757 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 C3orf30Q96M34 536 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 TMEM59Q9BXS4 323 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ZNF69Q9UC07 566 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 RAB22AQ9UL26 194 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PRSS37A4D1T9 235 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 GLRA1P23415 457 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SNRPGP62308 76 aaKnown RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 RAB11AP62491 216 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 HMGN2P46Q86SG4 172 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 ELMOD2Q8IZ81 293 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 HRASLS5Q96KN8 279 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 GPR78Q96P69 363 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 APMAPQ9HDC9 416 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OSGIN2Q9Y236 505 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 GREB1LQ9C091 1923 aaPredicted RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OPN1LWP04000 364 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 CSN2P05814 226 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 GSTP1P09211 210 aaKnown RBP12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 TAS2R20P59543 309 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PHC1P78364 1004 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 BCL2A1Q16548 175 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 PELI3Q8N2H9 469 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OR9Q2Q8NGE9 314 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SLC25A31Q9H0C2 315 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 SIAEQ9HAT2 523 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 GLTPQ9NZD2 209 aa12.17□□□□□ -0.46
PRPF38A-201ENST00000257181 TVP23AA6NH52 213 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 XPNPEP2O43895 674 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 BCAS1O75363 584 aaPredicted RBP12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 AKAIN1P0CW23 69 aa12.16□□□□□ -0.46
PRPF38A-201ENST00000257181 TACR1P25103 407 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms