RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 DAP3P51398 398 aaKnown RBP14.52□□□□□ -0.08
UBE3D-201ENST00000237186 ETFDHQ16134 617 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 CCDC92Q53HC0 331 aaPredicted RBP14.52□□□□□ -0.08
UBE3D-201ENST00000237186 TMEM69Q5SWH9 247 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 FAM205BPQ63HN1 556 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 OR5M10Q6IEU7 315 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 SLC35D2Q76EJ3 337 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 CPEB2Q7Z5Q1 589 aaKnown RBP14.52□□□□□ -0.08
UBE3D-201ENST00000237186 DEDD2Q8WXF8 326 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 SPSB2Q99619 263 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 ABHD6Q9BV23 337 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 ADAMTS20P59510 1910 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 CEP192Q8TEP8 1941 aa14.52□□□□□ -0.08
UBE3D-201ENST00000237186 TRBV11-1A0A0K0K1C0 115 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 ANKRD20A5PA0PJZ0 165 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 PNPP00491 289 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 MT-ND4P03905 459 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 SPARCP09486 303 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 HLA-DOBP13765 273 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 DHPSP49366 369 aaPredicted RBP14.52□□□□□ -0.09
UBE3D-201ENST00000237186 RIDAP52758 137 aaKnown RBP14.52□□□□□ -0.09
UBE3D-201ENST00000237186 ADAM8P78325 824 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 LAMTOR1Q6IAA8 161 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 DNM1P34Q6PK57 102 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 TSSK4Q6SA08 328 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 LYPD8Q6UX82 237 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 ZNF227Q86WZ6 799 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 CATSPERDQ86XM0 798 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 SERPINA12Q8IW75 414 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 DNAAF1Q8NEP3 725 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 LILRB4Q8NHJ6 448 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 GRPEL2Q8TAA5 225 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 ATOH1Q92858 354 aaPredicted RBP14.52□□□□□ -0.09
UBE3D-201ENST00000237186 DDIT4LQ96D03 193 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 ARL5BQ96KC2 179 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 KCNK17Q96T54 332 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 NPAS1Q99742 590 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 TMEM165Q9HC07 324 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 STMN3Q9NZ72 180 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 COA3Q9Y2R0 106 aaPredicted RBP14.52□□□□□ -0.09
UBE3D-201ENST00000237186 B3GALT1Q9Y5Z6 326 aa14.52□□□□□ -0.09
UBE3D-201ENST00000237186 XRCC3O43542 346 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 SRSF10O75494 262 aaKnown RBP14.51□□□□□ -0.09
UBE3D-201ENST00000237186 ZFAND5O76080 213 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 GLSO94925 669 aaPredicted RBP14.51□□□□□ -0.09
UBE3D-201ENST00000237186 MAS1P04201 325 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 IL11P20809 199 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 RPS15P62841 145 aaKnown RBP14.51□□□□□ -0.09
UBE3D-201ENST00000237186 MELKQ14680 651 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 OLFML2AQ68BL7 652 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 PMS2CLQ68D20 193 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 FAM166AQ6J272 317 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 MTFR2Q6P444 385 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 DEGS2Q6QHC5 323 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 FGD2Q7Z6J4 655 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 KRT77Q7Z794 578 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 SLC26A10Q8NG04 563 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 OR52N5Q8NH56 324 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 THAP3Q8WTV1 239 aaPredicted RBP14.51□□□□□ -0.09
UBE3D-201ENST00000237186 MRGPRX4Q96LA9 322 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 CHST11Q9NPF2 352 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 MED11Q9P086 117 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 PILRBQ9UKJ0 227 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 RCE1Q9Y256 329 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 LAMA1P25391 3075 aa14.51□□□□□ -0.09
UBE3D-201ENST00000237186 C2orf72A6NCS6 295 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 AQP8O94778 261 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 HRGP04196 525 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PSMB1P20618 241 aaKnown RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 TAS2R20P59543 309 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 EIF2B1Q14232 305 aaKnown RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ANKRD16Q6P6B7 361 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ARSKQ6UWY0 536 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 NHLRC1Q6VVB1 395 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 BPHLQ86WA6 291 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 OR11H7Q8NGC8 314 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 NAT6Q93015 286 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 CCDC74BQ96LY2 380 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ULBP3Q9BZM4 244 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 SLC17A5Q9NRA2 495 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 SDHAF3Q9NRP4 125 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PTTG3PQ9NZH4 202 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 MYOTQ9UBF9 498 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 KLK11Q9UBX7 282 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 C19orf25Q9UFG5 118 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 FBXL3Q9UKT7 428 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 SLC22A13Q9Y226 551 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 B3GALT5Q9Y2C3 310 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 CACNA1EQ15878 2313 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 COL6A3P12111 3177 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 MYO15AQ9UKN7 3530 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 VCANP13611 3396 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 LIPT2A6NK58 231 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 NPIPA5E9PKD4 350 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 GMDSO60547 372 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PRAF2O60831 178 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PEX14O75381 377 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PDGFBP01127 241 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PTGDSP41222 190 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms