RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 DUSP19Q8WTR2 217 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 ZNF587Q96SQ5 575 aaPredicted RBP19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 ULBP3Q9BZM4 244 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 DHDHQ9UQ10 334 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 FTCDNL1E5RQL4 147 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 ADAM10O14672 748 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 TSC22D2O75157 780 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 SLC22A5O76082 557 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 CD2P06729 351 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 CTLA4P16410 223 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 C4BPBP20851 252 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 DCTDP32321 178 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 EIF2B1Q14232 305 aaKnown RBP19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 LINC00303Q3SY05 128 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 FAM166AQ6J272 317 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 BEX1Q9HBH7 125 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 CKLFQ9UBR5 152 aa19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 ING1Q9UK53 422 aaPredicted RBP19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 TP53BP1Q12888 1972 aaPredicted RBP19.77■□□□□ 0.76
SMARCD2-201ENST00000225742 IGLV3-12A0A075B6K2 115 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 C17orf51A8MQB3 221 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 CREBL2O60519 120 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 CCKBRP32239 447 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 APOBEC1P41238 236 aaKnown RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 AFF3P51826 1226 aaKnown RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 C17orf67Q0P5P2 114 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 LGALSLQ3ZCW2 172 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 GLT8D1Q68CQ7 371 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 SLC25A25Q6KCM7 469 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 RHBDD2Q6NTF9 364 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 Q6ZTK2 550 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 LANCL3Q6ZV70 420 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 ZNF680Q8NEM1 530 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 OR52N5Q8NH56 324 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 MFSD8Q8NHS3 518 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 ANGPTL6Q8NI99 470 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 FAM3DQ96BQ1 224 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 ABHD6Q9BV23 337 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 HEXA-AS1Q9H8Q6 139 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 MEGF11A6BM72 1044 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 LINC00862A6NCI5 91 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 GIPP09681 153 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 TMIGD3P0DMS9 266 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 PTGS2P35354 604 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 RAD52P43351 418 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 OR3A3P47888 321 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 POU3F4P49335 361 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 DAP3P51398 398 aaKnown RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 ZNF626Q68DY1 528 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 SLC35D2Q76EJ3 337 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 COX15Q7KZN9 410 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 KANSL1Q7Z3B3 1105 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 SLC25A45Q8N413 288 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 OR51D1Q8NGF3 324 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 OR2T35Q8NGX2 323 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 OR8K3Q8NH51 312 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 NUBPLQ8TB37 319 aa19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 CLEC4MQ9H2X3 399 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 METTL17Q9H7H0 456 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-201ENST00000225742 CEP290O15078 2479 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 H0YC42 278 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 BCAT2O15382 392 aaPredicted RBP19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 WISP1O95388 367 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 ALDOBP05062 364 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 NAGAP17050 411 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 SELENOPP49908 381 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 STARD6P59095 220 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 DHODHQ02127 395 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 RBMS2Q15434 407 aaKnown RBP19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 DEGS2Q6QHC5 323 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 SPEM1Q8N4L4 309 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 MEIOBQ8N635 442 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 ATOH1Q92858 354 aaPredicted RBP19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 SHDQ96IW2 340 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 CTSFQ9UBX1 484 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 PPIEQ9UNP9 301 aaKnown RBP19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 SLC22A13Q9Y226 551 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 R4GMQ9 66 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 ADAMTS20P59510 1910 aa19.75■□□□□ 0.75
SMARCD2-201ENST00000225742 CIB4A0PJX0 185 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 SULT1C2O00338 296 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 ZNF208O43345 1280 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 PNPP00491 289 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 IFNA7P01567 189 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 IGFBP3P17936 291 aaPredicted RBP19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 RAP2BP61225 183 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 PUDPQ08623 228 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 PCK2Q16822 640 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 ODF4Q2M2E3 257 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 C2orf76Q3KRA6 126 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 ESCO2Q56NI9 601 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 WDR45BQ5MNZ6 344 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 C1QTNF12Q5T7M4 302 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 TMEM225Q6GV28 225 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 MAMSTRQ6ZN01 415 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 NDUFAF7Q7L592 441 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 ASB10Q8WXI3 467 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 OR11A1Q9GZK7 315 aa19.74■□□□□ 0.75
SMARCD2-201ENST00000225742 MGAT4CQ9UBM8 478 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms