RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CD3DP04234 171 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ITGB2P05107 769 aa12□□□□□ -0.49
SRP54-201ENST00000216774 PRKACBP22694 351 aa12□□□□□ -0.49
SRP54-201ENST00000216774 YOD1Q5VVQ6 348 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 KCTD18Q6PI47 426 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 GSG1LQ6UXU4 331 aa12□□□□□ -0.49
SRP54-201ENST00000216774 BPHLQ86WA6 291 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 ZNF519Q8TB69 540 aa12□□□□□ -0.49
SRP54-201ENST00000216774 CCDC107Q8WV48 283 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ADIPOR1Q96A54 375 aa12□□□□□ -0.49
SRP54-201ENST00000216774 CLIP3Q96DZ5 547 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ELF4Q99607 663 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 KLHDC3Q9BQ90 382 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ARL6Q9H0F7 186 aa12□□□□□ -0.49
SRP54-201ENST00000216774 EXO5Q9H790 373 aa12□□□□□ -0.49
SRP54-201ENST00000216774 C8orf33Q9H7E9 229 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 SCPEP1Q9HB40 452 aa12□□□□□ -0.49
SRP54-201ENST00000216774 CLEC1BQ9P126 229 aa12□□□□□ -0.49
SRP54-201ENST00000216774 DHDHQ9UQ10 334 aa12□□□□□ -0.49
SRP54-201ENST00000216774 XIRP2A4UGR9 3374 aa12□□□□□ -0.49
SRP54-201ENST00000216774 DNAH14Q0VDD8 3507 aa12□□□□□ -0.49
SRP54-201ENST00000216774 FXYD6-FXYD2A0A087WZ82 144 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TMEM272A0A1B0GTI8 110 aa12□□□□□ -0.49
SRP54-201ENST00000216774 A0A1W2PQD3 144 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TMEM150CB9EJG8 249 aa12□□□□□ -0.49
SRP54-201ENST00000216774 KRBOX1C9JBD0 128 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TPD52L2O43399 206 aaKnown RBP12□□□□□ -0.49
SRP54-201ENST00000216774 EIF4E2O60573 245 aaKnown RBP12□□□□□ -0.49
SRP54-201ENST00000216774 AQP8O94778 261 aa12□□□□□ -0.49
SRP54-201ENST00000216774 KDM4BO94953 1096 aa12□□□□□ -0.49
SRP54-201ENST00000216774 SIX6O95475 246 aa12□□□□□ -0.49
SRP54-201ENST00000216774 IGKV3-11P04433 115 aa12□□□□□ -0.49
SRP54-201ENST00000216774 LPLP06858 475 aa12□□□□□ -0.49
SRP54-201ENST00000216774 HOXD4P09016 255 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 CD37P11049 281 aa12□□□□□ -0.49
SRP54-201ENST00000216774 RPA2P15927 270 aa12□□□□□ -0.49
SRP54-201ENST00000216774 FSTP19883 344 aa12□□□□□ -0.49
SRP54-201ENST00000216774 NUP62P37198 522 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 MAP2K6P52564 334 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TAS2R19P59542 299 aa12□□□□□ -0.49
SRP54-201ENST00000216774 RPL27P61353 136 aaKnown RBP12□□□□□ -0.49
SRP54-201ENST00000216774 DCAF7P61962 342 aa12□□□□□ -0.49
SRP54-201ENST00000216774 GK2Q14410 553 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 GLT8D1Q68CQ7 371 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TMEM225Q6GV28 225 aa12□□□□□ -0.49
SRP54-201ENST00000216774 OR7E24Q6IFN5 339 aa12□□□□□ -0.49
SRP54-201ENST00000216774 SLC35D2Q76EJ3 337 aa12□□□□□ -0.49
SRP54-201ENST00000216774 OVCH2Q7RTZ1 564 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TMEM151BQ8IW70 566 aa12□□□□□ -0.49
SRP54-201ENST00000216774 GABRG1Q8N1C3 465 aa12□□□□□ -0.49
SRP54-201ENST00000216774 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 OR1J4Q8NGS1 313 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ATOH1Q92858 354 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 SLC25A28Q96A46 364 aa12□□□□□ -0.49
SRP54-201ENST00000216774 POTEKPQ9BYX7 375 aa12□□□□□ -0.49
SRP54-201ENST00000216774 OR8D2Q9GZM6 311 aa12□□□□□ -0.49
SRP54-201ENST00000216774 CHRNA10Q9GZZ6 450 aa12□□□□□ -0.49
SRP54-201ENST00000216774 FXYD6Q9H0Q3 95 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TMEM138Q9NPI0 162 aa12□□□□□ -0.49
SRP54-201ENST00000216774 WBP1LQ9NX94 342 aa12□□□□□ -0.49
SRP54-201ENST00000216774 VSX1Q9NZR4 365 aaPredicted RBP12□□□□□ -0.49
SRP54-201ENST00000216774 PFDN2Q9UHV9 154 aa12□□□□□ -0.49
SRP54-201ENST00000216774 A0A0C4DFX4 3053 aa12□□□□□ -0.49
SRP54-201ENST00000216774 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 LILRA5A6NI73 299 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 A8MXK9 166 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 H3BSH0 61 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 H3BUI4 141 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 PMS2P2O95744 297 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 CD2P06729 351 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 POU3F2P20265 443 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 OC90Q02509 493 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 ACKR1Q16570 336 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 ARHGAP40Q5TG30 622 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 ALKAL2Q6UX46 152 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 TMEM229BQ8NBD8 167 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 C8orf44Q96CB5 159 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 DPYSL5Q9BPU6 564 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 SLC25A21Q9BQT8 299 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 SLCO5A1Q9H2Y9 848 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 MYOZ1Q9NP98 299 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 ZNF107Q9UII5 783 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 A0A0A6YYH2 397 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 IGLV1-36A0A0B4J1U3 117 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 A6NJ64 397 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 C11orf98E9PRG8 122 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 SLC25A12O75746 678 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 OR6A2O95222 327 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 PGCP20142 388 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 IL12BP29460 328 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 UBXN2BQ14CS0 331 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 DCAF12L2Q5VW00 463 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 ASPHD2Q6ICH7 369 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 C11orf88Q6PI97 169 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 FAM160A2Q8N612 972 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 COQ8AQ8NI60 647 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 EDAQ92838 391 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms