RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PRRT2Q7Z6L0 340 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 OR1A1Q9P1Q5 309 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 MED12Q93074 2177 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A0U1RQF3 1178 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 PMS2P2O95744 297 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 WNT11O96014 354 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ICAM2P13598 275 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 TACR1P25103 407 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 SFXN4Q6P4A7 337 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 SIAH1Q8IUQ4 282 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 TECTBQ96PL2 329 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 SIX2Q9NPC8 291 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ASIC5Q9NY37 505 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 CACNA1IQ9P0X4 2223 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF541Q9H0D2 1346 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 COX7A2P2O60397 106 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ITGB7P26010 798 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 CALCRP30988 508 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 CDKN3Q16667 212 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 OR2B11Q5JQS5 317 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 OR2T2Q6IF00 324 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 UTP23Q9BRU9 249 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 NTMT1Q9BV86 223 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 PTPRZ1P23471 2315 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 OR1D4P47884 311 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 LINC00346Q8IVM7 164 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 RANBP9Q96S59 729 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 PIGQQ9BRB3 760 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 NKX2-4Q9H2Z4 354 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A1B0GTQ1 180 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC5A10A0PJK1 596 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF785A8K8V0 405 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF85Q03923 595 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 RHOUQ7L0Q8 258 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 GRINAQ7Z429 371 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 DUSP23Q9BVJ7 150 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 PADI1Q9ULC6 663 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A0B4J203 849 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ADAM11O75078 769 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 HCCSP53701 268 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TAS2R60P59551 318 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TSEN54Q7Z6J9 526 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ADIPOR2Q86V24 386 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 RELL2Q8NC24 303 aaPredicted RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 CPEB3Q8NE35 698 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TIMD4Q96H15 378 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 GAL3ST2Q9H3Q3 398 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PTTG3PQ9NZH4 202 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 SLC23A1Q9UHI7 598 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ECM29Q5VYK3 1845 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TMEM200CA6NKL6 621 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 CEACAM7Q14002 265 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PRSS35Q8N3Z0 413 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TMEM230Q96A57 120 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 WDR83Q9BRX9 315 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PELI2Q9HAT8 420 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ABCA7Q8IZY2 2146 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF264O43296 627 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 CDH26Q8IXH8 852 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TMEM221A6NGB7 291 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 F5H697 171 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 STAG3L2P0CL84 134 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 KLHDC8BQ8IXV7 354 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 VGLL2Q8N8G2 317 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 OR4A4PQ8NGN8 299 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 CLEC4DQ8WXI8 215 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 RAB22AQ9UL26 194 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 P2RY10O00398 339 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 CCSO14618 274 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PLSCR1O15162 318 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 CNMDO75829 334 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PPP2CBP62714 309 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 DCAF12Q5T6F0 453 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 OR13C8Q8NGS7 320 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 GHSRQ92847 366 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 IGSF8Q969P0 613 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 A3GALT2U3KPV4 340 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 INTS1Q8N201 2190 aaKnown RBP13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TRAV34A0A0B4J273 112 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 TTRP02766 147 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 OR5K2Q8NHB8 316 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 SMIM7Q9BQ49 75 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A1W2PPQ1 181 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 M0QZ24 198 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 ONECUT2O95948 504 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 P2RY2P41231 377 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 PPP1CBP62140 327 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 FDX2Q6P4F2 183 aa13.5□□□□□ -0.25
SPTLC2-201ENST00000216484 OSTM1Q86WC4 334 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms