RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 C14orf144Q96I85 54 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 GPR78Q96P69 363 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 FRG2BQ96QU4 278 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 OR5B12Q96R08 314 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 PNKPQ96T60 521 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 SERPINI1Q99574 410 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 EPYCQ99645 322 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 TRIM51Q9BSJ1 452 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 HCAR1Q9BXC0 346 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 RAB11FIP5Q9BXF6 653 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 UGT2B28Q9BY64 529 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 PRRG4Q9BZD6 226 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 RAB34Q9BZG1 259 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 ACTR3CQ9C0K3 210 aaPredicted RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 TMEM39BQ9GZU3 492 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 Q9H8V8 135 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 PATZ1Q9HBE1 687 aaKnown RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 BEX1Q9HBH7 125 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 WFDC1Q9HC57 220 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 NOX4Q9NPH5 578 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 OLFML3Q9NRN5 406 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 ABHD10Q9NUJ1 306 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 C2orf42Q9NWW7 574 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 DDIT4Q9NX09 232 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 B4GALT7Q9UBV7 327 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 Q9UFV3 132 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 TESQ9UGI8 421 aaKnown RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 VPREB3Q9UKI3 123 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 FBXO4Q9UKT5 387 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 WDR83OSQ9Y284 106 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 B3GALT5Q9Y2C3 310 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 SLC17A4Q9Y2C5 497 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 KLHDC2Q9Y2U9 406 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 KCNIP3Q9Y2W7 256 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 HEMK1Q9Y5R4 338 aaPredicted RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 SAR1BQ9Y6B6 198 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 SOGA1O94964 1423 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 UHRF1BP1Q6BDS2 1440 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 ARHGEF17Q96PE2 2063 aaPredicted RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 CECR2Q9BXF3 1484 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 TRAV18A0A075B6X5 111 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 A0A0A6YYD5 115 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 A0A0B4J2E0 115 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 KIR2DS1A0A191URI9 304 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 CCDC195A0A1B0GUA6 201 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 A0A1B0GX12 115 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 OR6C6A6NF89 314 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 IGLON5A6NGN9 336 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 RNF212BA8MTL3 300 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 TRDCB7Z8K6 153 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 E5RGE8 158 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 G3V2T6 193 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 CDC7O00311 574 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 SLC1A7O00341 560 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 PHYHO14832 338 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 EPHB6O15197 1021 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 SIGLEC5O15389 551 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 SSNA1O43805 119 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 OR2B3O76000 313 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 STK17BO94768 372 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 VENTXO95231 258 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 LRATO95237 230 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 NDUFA10O95299 355 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 ATP6V1G2O95670 118 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 RAB36O95755 333 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 MT-CO2P00403 227 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 MMP1P03956 469 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 CD74P04233 296 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 HOXC4P09017 264 aaPredicted RBP2.64□□□□□ -1.99
VIM-210ENST00000637053 IFI30P13284 250 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 ARSBP15848 533 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 PGCP20142 388 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 C4BPBP20851 252 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 CXCR1P25024 350 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 RPS12P25398 132 aaKnown RBP2.64□□□□□ -1.99
VIM-210ENST00000637053 PAX6P26367 422 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 ZFP36P26651 326 aaKnown RBP2.64□□□□□ -1.99
VIM-210ENST00000637053 DUSP1P28562 367 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 SDC4P31431 198 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 TNFSF9P41273 254 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 MAP2K4P45985 399 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 PSMD8P48556 350 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 SERPINB10P48595 397 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 PTH2RP49190 550 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 GZMKP49863 264 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 HLCSP50747 726 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 MAZP56270 477 aaKnown RBP2.64□□□□□ -1.99
VIM-210ENST00000637053 OR10A3P58181 314 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 CD81P60033 236 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 OSTNP61366 133 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 GTF2BQ00403 316 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 SRYQ05066 204 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 ZNF91Q05481 1191 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 PRKCDQ05655 676 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 ZNF844Q08AG5 666 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 GPR17Q13304 367 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 GAB1Q13480 694 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 KIR2DS1Q14954 304 aa2.64□□□□□ -1.99
VIM-210ENST00000637053 TRAM1Q15629 374 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms