RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 RAC3P60763 192 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 KRTAP1-1Q07627 177 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 ITGADQ13349 1161 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 SPCS2Q15005 226 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 TAB1Q15750 504 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 MOGQ16653 247 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
CTSD-208ENST00000636843 SLC25A53Q5H9E4 307 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 CBLN3Q6UW01 205 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 CXXC5Q7LFL8 322 aaKnown RBP11.14□□□□□ -0.63
CTSD-208ENST00000636843 SSX8Q7RTT4 187 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 NKAIN4Q8IVV8 208 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 SMAP2Q8WU79 429 aaPredicted RBP11.14□□□□□ -0.63
CTSD-208ENST00000636843 SLC38A2Q96QD8 506 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 GPA33Q99795 319 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 POTEKPQ9BYX7 375 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 BCO1Q9HAY6 547 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 KLHL9Q9P2J3 617 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTSD-208ENST00000636843 SLC7A7Q9UM01 511 aa11.14□□□□□ -0.63
CTSD-208ENST00000636843 ATRQ13535 2644 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 NPIPB9F8W1W9 429 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 M0R082 166 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 M0R3G1 203 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 OIP5O43482 229 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 EIF4E2O60573 245 aaKnown RBP11.13□□□□□ -0.63
CTSD-208ENST00000636843 NTN1O95631 604 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 THY1P04216 161 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 SOD3P08294 240 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 PRKCAP17252 672 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 SERPINB10P48595 397 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 EFNB1P98172 346 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 HOXC5Q00444 222 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTSD-208ENST00000636843 SELENBP1Q13228 472 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 OR1Q1Q15612 314 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 TSC22D1Q15714 1073 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 TOMM34Q15785 309 aaPredicted RBP11.13□□□□□ -0.63
CTSD-208ENST00000636843 ACSM5Q6NUN0 579 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 ZNF613Q6PF04 617 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 Q6ZT83 130 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 BHLHA15Q7RTS1 189 aaPredicted RBP11.13□□□□□ -0.63
CTSD-208ENST00000636843 OR5W2Q8NH69 310 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 TMEM80Q96HE8 168 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 FAM46AQ96IP4 442 aaKnown RBP11.13□□□□□ -0.63
CTSD-208ENST00000636843 TSSK6Q9BXA6 273 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 REG4Q9BYZ8 158 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.13□□□□□ -0.63
CTSD-208ENST00000636843 DNAJC27Q9NZQ0 273 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 KCNE5Q9UJ90 142 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
CTSD-208ENST00000636843 SONP18583 2426 aaKnown RBP11.13□□□□□ -0.63
CTSD-208ENST00000636843 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 ANK3Q12955 4377 aaKnown RBP11.12□□□□□ -0.63
CTSD-208ENST00000636843 NPIPA5A0A0B4J1W7 369 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 CENPVL1A0A0U1RR11 272 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 ZNF814B7Z6K7 855 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 NPIPA7E9PJI5 369 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
CTSD-208ENST00000636843 TLX2O43763 284 aaPredicted RBP11.12□□□□□ -0.63
CTSD-208ENST00000636843 PRKYO43930 277 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 PTHP01270 115 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 NPIPA8P0DM63 369 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 DBTP11182 482 aaKnown RBP11.12□□□□□ -0.63
CTSD-208ENST00000636843 ENPP1P22413 925 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 NR4A1P22736 598 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 OR3A2P47893 321 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTSD-208ENST00000636843 ZNF91Q05481 1191 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 ZNF141Q15928 474 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 DGUOKQ16854 277 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 KLHL22Q53GT1 634 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 SLC46A3Q7Z3Q1 461 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 NRMQ8IXM6 262 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 CMIPQ8IY22 773 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 IQCF1Q8N6M8 205 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 ATP6V1C2Q8NEY4 427 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 TMEM163Q8TC26 289 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 TMEM255BQ8WV15 326 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 OIT3Q8WWZ8 545 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 NEUROG1Q92886 237 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 LGALS12Q96DT0 336 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 HS6ST2Q96MM7 605 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 PRSS27Q9BQR3 290 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 SLCO5A1Q9H2Y9 848 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 EGLN3Q9H6Z9 239 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 TMEM27Q9HBJ8 222 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 TBC1D23Q9NUY8 699 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 IL20Q9NYY1 176 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 ERGIC3Q9Y282 383 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 TMEM5Q9Y2B1 443 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 CADP27708 2225 aa11.12□□□□□ -0.63
CTSD-208ENST00000636843 FBN3Q75N90 2809 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 DPRXA6NFQ7 191 aa11.11□□□□□ -0.63
CTSD-208ENST00000636843 EFCAB9A8MZ26 197 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms