RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FBXO24O75426 580 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 BANF1O75531 89 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 FGF18O76093 207 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 PTP4A2Q12974 167 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 DOC2BQ14184 412 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM183AQ8IXX5 376 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 GPR32P1Q8NGA4 272 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 OR4F5Q8NH21 305 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM239Q8WW34 195 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 TSLPQ969D9 159 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 EID2BQ96D98 161 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 OR4F4Q96R69 305 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 TP53RKQ96S44 253 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 VDAC3Q9Y277 283 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 DOCK4Q8N1I0 1966 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 ARFGEF2Q9Y6D5 1785 aa5.59□□□□□ -1.52
SCN1A-212ENST00000636194 A0A0J9YY10 115 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 KDM4FA0A1W2PPD8 638 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM82A0PJX8 343 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF264O43296 627 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 POU3F3P20264 500 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 DUSP1P28562 367 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 CD200P41217 278 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 KIR3DL2P43630 455 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 KIR2DS3Q14952 304 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PARS2Q7L3T8 475 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 C10orf126Q8N4M7 172 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS3P2Q8NHM4 247 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PLK3Q9H4B4 646 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 EXOSC3Q9NQT5 275 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 HSFX1Q9UBD0 423 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 RCL1Q9Y2P8 373 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 AUP1Q9Y679 476 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SCN10AQ9Y5Y9 1956 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 DLC1Q96QB1 1528 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 M0R143 59 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 RECKO95980 971 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 HOXB5P09067 269 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 HSD17B1P14061 328 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 DNAJB13P59910 316 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 IL24Q13007 206 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF273Q14593 569 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 LBHQ53QV2 105 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF322Q6U7Q0 402 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 LSRQ86X29 649 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ADGRG5Q8IZF4 528 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 EMID1Q96A84 441 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 CABLES2Q9BTV7 478 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 GSX1Q9H4S2 264 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 MUTYHQ9UIF7 546 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 UBIAD1Q9Y5Z9 338 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 M0R135 149 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PHF1O43189 567 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OR2J2O76002 312 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PTNP21246 168 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 HIST1H1TP22492 207 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ACRV1P26436 265 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OR1E2P47887 323 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ATP4BP51164 291 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 REEP5Q00765 189 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 GAB4Q2WGN9 574 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SOWAHCQ53LP3 525 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 KCTD11Q693B1 232 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 C6orf201Q7Z4U5 140 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 MEX3DQ86XN8 651 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 GLB1L2Q8IW92 636 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS35Q8N3Z0 413 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OR4F17Q8NGA8 305 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OR10A7Q8NGE5 316 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PCNPQ8WW12 178 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 DVL3Q92997 716 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TLCD1Q96CP7 247 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF799Q96GE5 643 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SUSD3Q96L08 255 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 LYSMD1Q96S90 227 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 QRSL1Q9H0R6 528 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 A0A1W2PP55 124 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 AIFM1O95831 613 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TCN2P20062 427 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ARR3P36575 388 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 CXCL9Q07325 125 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 FUT2Q10981 343 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PROX2Q3B8N5 592 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TRMT2AQ8IZ69 625 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OR4F6Q8NGB9 312 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 UBTD2Q8WUN7 234 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SFT2D1Q8WV19 159 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 GNPNAT1Q96EK6 184 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 MOCOSQ96EN8 888 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 POM121L2Q96KW2 1035 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 MGLLQ99685 303 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SH3BGRL3Q9H299 93 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 MED9Q9NWA0 146 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 V9GY05 133 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 VWDEQ8N2E2 1590 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 A0A0B4J293 547 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ITGAMP11215 1152 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ELAVL4P26378 380 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms