RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CYSLTR2Q9NS75 346 aa15.18■□□□□ 0.02
CLN6-212ENST00000636020 PSMC3IPQ9P2W1 217 aaPredicted RBP15.18■□□□□ 0.02
CLN6-212ENST00000636020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.18■□□□□ 0.02
CLN6-212ENST00000636020 TBK1Q9UHD2 729 aa15.18■□□□□ 0.02
CLN6-212ENST00000636020 ZDHHC8Q9ULC8 765 aa15.18■□□□□ 0.02
CLN6-212ENST00000636020 ZNF443Q9Y2A4 671 aaPredicted RBP15.18■□□□□ 0.02
CLN6-212ENST00000636020 TET2Q6N021 2002 aaPredicted RBP15.17■□□□□ 0.02
CLN6-212ENST00000636020 A0A087WUJ7 227 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 LOC100653049A0A140TA62 436 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 ENTPD5O75356 428 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 KRT34O76011 436 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 LIPAP38571 399 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 CCT5P48643 541 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 CSNK1A1P48729 337 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 TXNL4AP83876 142 aaKnown RBP15.17■□□□□ 0.02
CLN6-212ENST00000636020 EMX2Q04743 252 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 PCLAFQ15004 111 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 SPATA46Q5T0L3 261 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 THEM4Q5T1C6 240 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 RNF220Q5VTB9 566 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 ZNF774Q6NX45 483 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 C5orf46Q6UWT4 87 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 ZSCAN4Q8NAM6 433 aaPredicted RBP15.17■□□□□ 0.02
CLN6-212ENST00000636020 AGR3Q8TD06 166 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 TUBGCP3Q96CW5 907 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 TMEM38BQ9NVV0 291 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 ASIC5Q9NY37 505 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 TRIM33Q9UPN9 1127 aa15.17■□□□□ 0.02
CLN6-212ENST00000636020 IGKV1D-42A0A075B6H8 117 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 TRAV36DV7A0A075B6V5 113 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 KIR2DS1A0A191URI9 304 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 CEACAM18A8MTB9 384 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 NQO1P15559 274 aaKnown RBP15.16■□□□□ 0.02
CLN6-212ENST00000636020 ANXA11P50995 505 aaKnown RBP15.16■□□□□ 0.02
CLN6-212ENST00000636020 SMU1Q2TAY7 513 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 GPR157Q5UAW9 335 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 C11orf87Q6NUJ2 197 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 DPPA2Q7Z7J5 298 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 C1orf174Q8IYL3 243 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 VPS37AQ8NEZ2 397 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 IFT81Q8WYA0 676 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 TMEM54Q969K7 222 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 SIGLEC11Q96RL6 698 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 C16orf95Q9H693 158 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 AURKAIP1Q9NWT8 199 aaPredicted RBP15.16■□□□□ 0.02
CLN6-212ENST00000636020 NOP53Q9NZM5 478 aaKnown RBP15.16■□□□□ 0.02
CLN6-212ENST00000636020 KLHL14Q9P2G3 628 aa15.16■□□□□ 0.02
CLN6-212ENST00000636020 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLN6-212ENST00000636020 V9GYY5 206 aaPredicted RBP15.16■□□□□ 0.02
CLN6-212ENST00000636020 IQCMA0A1B0GVH7 501 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 FARS2O95363 451 aaKnown RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 MDH2P40926 338 aaKnown RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 TNFAIP6P98066 277 aaPredicted RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 HOXC5Q00444 222 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 MAD2L1Q13257 205 aaPredicted RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 COX20Q5RI15 118 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 MBNL2Q5VZF2 373 aaKnown RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 Q6ZSV7 163 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 LRRC34Q8IZ02 419 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 ZNF101Q8IZC7 436 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 TBC1D15Q8TC07 691 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 KLF14Q8TD94 323 aaPredicted RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 THOC1Q96FV9 657 aaKnown RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 ARHGDIGQ99819 225 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 C12orf10Q9HB07 376 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 NECAP2Q9NVZ3 263 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 GLTPQ9NZD2 209 aa15.15■□□□□ 0.02
CLN6-212ENST00000636020 CGGBP1Q9UFW8 167 aaPredicted RBP15.15■□□□□ 0.02
CLN6-212ENST00000636020 SACSQ9NZJ4 4579 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 TNFRSF13BO14836 293 aaPredicted RBP15.14■□□□□ 0.01
CLN6-212ENST00000636020 THRBP10828 461 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 CPT2P23786 658 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 PLP2Q04941 152 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 LARS2Q15031 903 aaKnown RBP15.14■□□□□ 0.01
CLN6-212ENST00000636020 SLC36A2Q495M3 483 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 LRFN4Q6PJG9 635 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 SCAIQ8N9R8 606 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 RBM15BQ8NDT2 890 aaKnown RBP15.14■□□□□ 0.01
CLN6-212ENST00000636020 OR4K5Q8NGD3 323 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 SLC25A40Q8TBP6 338 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 SAMD8Q96LT4 415 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 SPATA9Q9BWV2 254 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 MSL2Q9HCI7 577 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 A4GALTQ9NPC4 353 aa15.14■□□□□ 0.01
CLN6-212ENST00000636020 CCDC154A6NI56 674 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 BGLAPP02818 100 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 CCNOP22674 350 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 APLNRP35414 380 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 WNT5AP41221 380 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 FGF12P61328 243 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 PUDPQ08623 228 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 CDK5R2Q13319 367 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 SLC16A14Q7RTX9 510 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 PXKQ7Z7A4 578 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 OR6S1Q8NH40 331 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 TESCQ96BS2 214 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 CCDC115Q96NT0 180 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 RHOXF2Q9BQY4 288 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 SLC19A3Q9BZV2 496 aa15.13■□□□□ 0.01
CLN6-212ENST00000636020 OR2J1Q9GZK6 312 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms