RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CISD1Q9NZ45 108 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 SLC7A8Q9UHI5 535 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 ZNF346Q9UL40 294 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
SNRPA1-216ENST00000626000 HRNRQ86YZ3 2850 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 PDZD2O15018 2839 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 AKAP6Q13023 2319 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 A0A1W2PR80 420 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 TCRBV3S1A0A5B6 114 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 SMPD2O60906 423 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 TXNDC12O95881 172 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 CD53P19397 219 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 ART1P52961 327 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 PCBD1P61457 104 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 PLP2Q04941 152 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 COX10Q12887 443 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 KRR1Q13601 381 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 MICAQ29983 383 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 RFX4Q33E94 735 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 SPNS3Q6ZMD2 512 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 FAM122BQ7Z309 247 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 SYT14Q8NB59 555 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 KBTBD8Q8NFY9 601 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 OR4C15Q8NGM1 316 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 SMAP2Q8WU79 429 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 CANT1Q8WVQ1 401 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 DNAJC9Q8WXX5 260 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 HDAC2Q92769 488 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 NMD3Q96D46 503 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 TSPAN32Q96QS1 320 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 BAIAP2Q9UQB8 552 aa12.21□□□□□ -0.45
SNRPA1-216ENST00000626000 DSCAMO60469 2012 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 PRSS37A4D1T9 235 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 E2F6O75461 281 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 CD79AP11912 226 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 FCGR1AP12314 374 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 PAX1P15863 534 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 FUT4P22083 530 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 NOS3P29474 1203 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 CRABP1P29762 137 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 RAB1AP62820 205 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 ERVK-25P63136 954 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 NAAAQ02083 359 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 ETFDHQ16134 617 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 C1orf146Q5VVC0 180 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 UNQ6126/PRO20091Q6UXV3 157 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 ZNF620Q6ZNG0 422 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 SLC16A14Q7RTX9 510 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 IGFN1Q86VF2 1251 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 FBXL14Q8N1E6 418 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 PAPD5Q8NDF8 572 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 NRGNQ92686 78 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 DGCR6LQ9BY27 220 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 DNAJB9Q9UBS3 223 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 CDH10Q9Y6N8 788 aa12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 HEATR1Q9H583 2144 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-216ENST00000626000 CADP27708 2225 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 IQCMA0A1B0GVH7 501 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 SLC22A23A1A5C7 686 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 RENP00797 406 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 SERPINA5P05154 406 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 CECR9P0C854 216 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 IDH3GP51553 393 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 RPS23P62266 143 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 RUNX1T1Q06455 604 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 FAM27BQ5VT28 67 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 ZNF770Q6IQ21 691 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 CD300LDQ6UXZ3 194 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 RASSF6Q6ZTQ3 369 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 SYT9Q86SS6 491 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 DTX2Q86UW9 622 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 MDP1Q86V88 176 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 JAZF1Q86VZ6 243 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 MEX3DQ86XN8 651 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 C1orf174Q8IYL3 243 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 AQP11Q8NBQ7 271 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 NUP37Q8NFH4 326 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 GIPC3Q8TF64 312 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 NRBF2Q96F24 287 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 Q96M85 177 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 IFT27Q9BW83 186 aa12.19□□□□□ -0.46
SNRPA1-216ENST00000626000 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms