RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RGS8P57771 180 aaPredicted RBP12.42□□□□□ -0.42
PNKP-218ENST00000625299 HSF2Q03933 536 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 ZNF154Q13106 437 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 STX3Q13277 289 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 RGNQ15493 299 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 SLC9A3R2Q15599 337 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 OR1Q1Q15612 314 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 SPATC1Q76KD6 591 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 JAZF1Q86VZ6 243 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 LRRC18Q8N456 261 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 CPEB3Q8NE35 698 aaKnown RBP12.42□□□□□ -0.42
PNKP-218ENST00000625299 OR6X1Q8NH79 312 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 NFKBIDQ8NI38 313 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 IPCEF1Q8WWN9 437 aaPredicted RBP12.42□□□□□ -0.42
PNKP-218ENST00000625299 EGLN1Q9GZT9 426 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 TCF7L2Q9NQB0 619 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 HAO1Q9UJM8 370 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 SLC13A4Q9UKG4 626 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 PPIAL4EA0A075B759 164 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 PPIAL4CA0A0B4J2A2 164 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 A0A0B4J2E0 115 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 A0A1B0GX12 115 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 ZSCAN5BA6NJL1 495 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 PPIAL4DF5H284 164 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 TRAPPC2LH3BP13 241 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 TM9SF1O15321 606 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 RNF13O43567 381 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 TPST1O60507 370 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 MFN2O95140 757 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 IGHMP01871 453 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 QDPRP09417 244 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 PPIAL4FP0DN26 164 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 IDO1P14902 403 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 ETS2P15036 469 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 RBMXP38159 391 aaKnown RBP12.41□□□□□ -0.42
PNKP-218ENST00000625299 MPV17P39210 176 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 CDH12P55289 794 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 SEC61A1P61619 476 aaKnown RBP12.41□□□□□ -0.42
PNKP-218ENST00000625299 SRSF4Q08170 494 aaKnown RBP12.41□□□□□ -0.42
PNKP-218ENST00000625299 ZNF718Q3SXZ3 478 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 THEM4Q5T1C6 240 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 LRFN4Q6PJG9 635 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 DPPA2Q7Z7J5 298 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 TMIGD2Q96BF3 282 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 PAIP2Q9BPZ3 127 aaKnown RBP12.41□□□□□ -0.42
PNKP-218ENST00000625299 ROPN1BQ9BZX4 212 aaPredicted RBP12.41□□□□□ -0.42
PNKP-218ENST00000625299 RAD21L1Q9H4I0 556 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 ROPN1Q9HAT0 212 aaPredicted RBP12.41□□□□□ -0.42
PNKP-218ENST00000625299 DCAF16Q9NXF7 216 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
PNKP-218ENST00000625299 CLIC1O00299 241 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 MT-ATP6P00846 226 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 KITP10721 976 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 ZNF12P17014 697 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 MMP15P51511 669 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 CLRN1P58418 232 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 BST1Q10588 318 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 FADDQ13158 208 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 TUSC1Q2TAM9 212 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 SPRNQ5BIV9 151 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 TMEM255AQ5JRV8 349 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 DHRS4L2Q6PKH6 230 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 SLC2A7Q6PXP3 512 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 C17orf107Q6ZR85 190 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 KRT73Q86Y46 540 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 ZNF101Q8IZC7 436 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 KLHL36Q8N4N3 616 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 SYT14Q8NB59 555 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 HIPK4Q8NE63 616 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 OR9I1Q8NGQ6 314 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 SLC25A44Q96H78 314 aaPredicted RBP12.4□□□□□ -0.42
PNKP-218ENST00000625299 CCT8L2Q96SF2 557 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 TMEM43Q9BTV4 400 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 SPATA5L1Q9BVQ7 753 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 EGFL7Q9UHF1 273 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 INSIG2Q9Y5U4 225 aa12.4□□□□□ -0.42
PNKP-218ENST00000625299 SOX21Q9Y651 276 aaPredicted RBP12.4□□□□□ -0.42
PNKP-218ENST00000625299 WNK1Q9H4A3 2382 aa12.4□□□□□ -0.43
PNKP-218ENST00000625299 MDFIC2A0A1B0GVS7 189 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 TRPC5OSA6NMA1 111 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 CLDN34H7C241 214 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 KPNA4O00629 521 aaPredicted RBP12.39□□□□□ -0.43
PNKP-218ENST00000625299 CH25HO95992 272 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 KNG1P01042 644 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 IGHV2-70P01814 119 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 IGHV4-38-2P0DP08 117 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 STOMP27105 288 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 AQP1P29972 269 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 MTNR1AP48039 350 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 ZNF84P51523 738 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 POLR2JP52435 117 aaKnown RBP12.39□□□□□ -0.43
PNKP-218ENST00000625299 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 GCNT6Q5T4J0 391 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 MSANTD1Q6ZTZ1 278 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 RANBP3LQ86VV4 465 aaPredicted RBP12.39□□□□□ -0.43
PNKP-218ENST00000625299 PARP8Q8N3A8 854 aa12.39□□□□□ -0.43
PNKP-218ENST00000625299 SPICQ8N5J4 248 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms