RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 Q6ZS52 159 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 MARCH3Q86UD3 253 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 CATSPERDQ86XM0 798 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 C9orf40Q8IXQ3 194 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 ZNF679Q8IYX0 411 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 OR8H3Q8N146 312 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 FTMTQ8N4E7 242 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 ZNF441Q8N8Z8 693 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 TMEM106AQ96A25 262 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 SLC25A28Q96A46 364 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 C8orf44Q96CB5 159 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 RBP7Q96R05 134 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 OR8D2Q9GZM6 311 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 PCED1AQ9H1Q7 454 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 SYT4Q9H2B2 425 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 ELOVL3Q9HB03 270 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 SEMA5BQ9P283 1151 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 KCNG2Q9UJ96 466 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 TMED7Q9Y3B3 224 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 PCDHGA5Q9Y5G8 931 aa8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 TP53BP1Q12888 1972 aaPredicted RBP8.68□□□□□ -1.02
IGHV3-54-201ENST00000622166 LOC100289279A0A1B0GTE1 492 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 HMSDA8MTL9 139 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 A8MVM7 634 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 LMO7DNF2Z398 122 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 PYCARD-AS1I3L0S3 204 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 HCRTR2O43614 444 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 NDUFB5O43674 189 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 SUSD5O60279 629 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 CTAG2O75638 210 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 GPANK1O95872 356 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 PDGFAP04085 211 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 AKAIN1P0CW23 69 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 VSIG10L2P0DP72 767 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 PTHLHP12272 177 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 IGFBP3P17936 291 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ANXA7P20073 488 aaKnown RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 OR1D4P47884 311 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 NR0B1P51843 470 aaKnown RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 DLX5P56178 289 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 TSPAN5P62079 268 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 INSM1Q01101 510 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ZP4Q12836 540 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 POU4F3Q15319 338 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 RBMS2Q15434 407 aaKnown RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MPPED2Q15777 294 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 TOMM34Q15785 309 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ACKR1Q16570 336 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MEP1BQ16820 701 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 C14orf28Q4W4Y0 310 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 C1QL3Q5VWW1 255 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 KCTD18Q6PI47 426 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MAMSTRQ6ZN01 415 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 TTLL10Q6ZVT0 673 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 BIVMQ86UB2 503 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ADGRG3Q86Y34 549 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 PRR22Q8IZ63 422 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MEIOBQ8N635 442 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 OR4C16Q8NGL9 310 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 OR6N1Q8NGY5 312 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 GPR119Q8TDV5 335 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 GPX8Q8TED1 209 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 METTL21AQ8WXB1 218 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ASB13Q8WXK3 278 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 PIGKQ92643 395 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 DAZLQ92904 295 aaKnown RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 FAM3DQ96BQ1 224 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 CLIP3Q96DZ5 547 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 WWTR1Q9GZV5 400 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 ALX4Q9H161 411 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MYOZ1Q9NP98 299 aaPredicted RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MRPL22Q9NWU5 206 aaKnown RBP8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 KIF25Q9UIL4 384 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 MAB21L2Q9Y586 359 aa8.67□□□□□ -1.02
IGHV3-54-201ENST00000622166 SLC22A23A1A5C7 686 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 MCRIP1C9JLW8 97 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 H0YC42 278 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 M0R233 179 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 PLPP3O14495 311 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 ADAM10O14672 748 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 SRSF10O75494 262 aaKnown RBP8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 SLC25A12O75746 678 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 RGS11O94810 467 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 CFDP00746 253 aaPredicted RBP8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 RRASP10301 218 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 CXCL2P19875 107 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 SDHBP21912 280 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 FBLP22087 321 aaKnown RBP8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 CRABP1P29762 137 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 SSTR2P30874 369 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 PRSS3P35030 304 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 PTGS2P35354 604 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 POU3F4P49335 361 aa8.66□□□□□ -1.02
IGHV3-54-201ENST00000622166 EFNA3P52797 238 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms