RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	FAM219A	Q8IW50	185 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SLC35F3	Q8IY50	421 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	TMED6	Q8WW62	240 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SLC22A18	Q96BI1	424 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SLC17A9	Q9BYT1	436 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	SRA1	Q9HD15	236 aa	Known RBP	13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	RXFP3	Q9NSD7	469 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	TINAG	Q9UJW2	476 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	TNFSF18	Q9UNG2	199 aa		13.08	□□□□□ -0.32
SYNRG-231	ENST00000622045	TMEM72	A0PK05	275 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	RNF222	A6NCQ9	220 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	CTSV	O60911	334 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	GPR75	O95800	540 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	IFNA4	P05014	189 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	TACSTD2	P09758	323 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ACTR1B	P42025	376 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	PPT1	P50897	306 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ACTR1A	P61163	376 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	C11orf87	Q6NUJ2	197 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	LEG1	Q6P5S2	330 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNF627	Q7L945	461 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNF676	Q8N7Q3	588 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR52R1	Q8NGF1	315 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR51A4	Q8NGJ6	313 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR6S1	Q8NH40	331 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	PHYHIP	Q92561	330 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	FGF22	Q9HCT0	170 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	CHRNA9	Q9UGM1	479 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	GTF2A1L	Q9UNN4	478 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	GGT3P	A6NGU5	568 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	KAT7	O95251	611 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	RAB3D	O95716	219 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	GNRH1	P01148	92 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	CT62	P0C5K7	136 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNF28	P17035	718 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	PRSS3	P35030	304 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ENPP7	Q6UWV6	458 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR5AK2	Q8NH90	309 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	HRH4	Q9H3N8	390 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045		A0A0B4J2A0	478 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	XRCC3	O43542	346 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	EML2	O95834	649 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	AK1	P00568	194 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	CALCB	P10092	127 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	MPPED2	Q15777	294 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	MICB	Q29980	383 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	NKAIN2	Q5VXU1	208 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ULK3	Q6PHR2	472 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	FIGLA	Q6QHK4	219 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	JAZF1	Q86VZ6	243 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ARMC10	Q8N2F6	343 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	GALNT16	Q8N428	558 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR4N2	Q8NGD1	307 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	MYADM	Q96S97	322 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	STAC	Q99469	402 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	ATG5	Q9H1Y0	275 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	SHPK	Q9UHJ6	478 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	SERTAD3	Q9UJW9	196 aa		13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	MRPS2	Q9Y399	296 aa	Known RBP	13.07	□□□□□ -0.32
SYNRG-231	ENST00000622045	CACNA1I	Q9P0X4	2223 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	ALOX12B	O75342	701 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	SNAPIN	O95295	136 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	HLA-A	P01891	365 aa	Known RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	PVR	P15151	417 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	RPS4Y1	P22090	263 aa	Known RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	CASR	P41180	1078 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	CCR4	P51679	360 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	NR0B1	P51843	470 aa	Known RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	RPS21	P63220	83 aa	Known RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	NR0B2	Q15466	257 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	TGIF1	Q15583	401 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	ARHGAP40	Q5TG30	622 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	BIVM	Q86UB2	503 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	NAA40	Q86UY6	237 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	APOO	Q9BUR5	198 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	ALG12	Q9BV10	488 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	C13orf42	A0A1B0GVH6	325 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	APEH	P13798	732 aa	Known RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	AVPR2	P30518	371 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	RAB5B	P61020	215 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	DHRS2	Q13268	280 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	KIRREL2	Q6UWL6	708 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNF227	Q86WZ6	799 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	GABRG1	Q8N1C3	465 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR1J4	Q8NGS1	313 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	C15orf40	Q8WUR7	153 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	CCDC107	Q8WV48	283 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	PRMT8	Q9NR22	394 aa	Predicted RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	POU3F4	P49335	361 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	LIPN	Q5VXI9	398 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	CD163	Q86VB7	1156 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	TMEM52	Q8NDY8	209 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	OR2A5	Q96R48	311 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	SELENOI	Q9C0D9	397 aa		13.06	□□□□□ -0.32
SYNRG-231	ENST00000622045	STARD5	Q9NSY2	213 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms