RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 UBL7Q96S82 380 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-213ENST00000620219 HES7Q9BYE0 225 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 B9D1Q9UPM9 204 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 DHDHQ9UQ10 334 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 POLHQ9Y253 713 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 B3GALT5Q9Y2C3 310 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 PAHP00439 452 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 HPP00738 406 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 IFI6P09912 130 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 DSCR4P56555 118 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-213ENST00000620219 TBC1D25Q3MII6 688 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 AAED1Q7RTV5 226 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 MEIOBQ8N635 442 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 OR2M3Q8NG83 312 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 ADGRL4Q9HBW9 690 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 EMC9Q9Y3B6 208 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 H3BMH7 237 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 DCTN6O00399 190 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 QDPRP09417 244 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 ZNF24P17028 368 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 MLF1P58340 268 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 STEAP3Q658P3 488 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 MFSD8Q8NHS3 518 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 MCUBQ9NWR8 336 aa14.14□□□□□ -0.15
CPSF1-213ENST00000620219 HTR3EA5X5Y0 456 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 PLPP3O14495 311 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 KLF4O43474 513 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 TMPPEQ6ZT21 453 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 LINGO2Q7L985 606 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 SLC16A9Q7RTY1 509 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 GPR87Q9BY21 358 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 ZNF700Q9H0M5 742 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 B3GAT2Q9NPZ5 323 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 RASD1Q9Y272 281 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 FREM3P0C091 2139 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 COL6A6A6NMZ7 2263 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 A0A1B0GVI7 797 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 SERPINA12Q8IW75 414 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 CHST4Q8NCG5 386 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 NPRL2Q8WTW4 380 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 LRFN5Q96NI6 719 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 B3GNT4Q9C0J1 378 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 NOX1Q9Y5S8 564 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 SIRT4Q9Y6E7 314 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-213ENST00000620219 ROS1P08922 2347 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 CENPBD1B2RD01 187 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 KLRC4-KLRK1H3BQV0 150 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 UGT2B10P36537 528 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 CLDN15P56746 228 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 OR10A3P58181 314 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 DMRTC1Q5HYR2 192 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 SNIP1Q8TAD8 396 aaKnown RBP14.13□□□□□ -0.15
CPSF1-213ENST00000620219 SLC26A1Q9H2B4 701 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 AKIP1Q9NQ31 210 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 ASH2LQ9UBL3 628 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 LSM2Q9Y333 95 aaKnown RBP14.13□□□□□ -0.15
CPSF1-213ENST00000620219 CEP295Q9C0D2 2601 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 CBFA2T3O75081 653 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 PPIAP62937 165 aaKnown RBP14.13□□□□□ -0.15
CPSF1-213ENST00000620219 AIMP2Q13155 320 aaKnown RBP14.13□□□□□ -0.15
CPSF1-213ENST00000620219 ELP5Q8TE02 316 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 PGAM5Q96HS1 289 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 UCN2Q96RP3 112 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 ADAM19Q9H013 955 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
CPSF1-213ENST00000620219 SNPHO15079 494 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 EIF2B2P49770 351 aaKnown RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 LIN37Q96GY3 246 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 SH3BGRL2Q9UJC5 107 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 MCTS1Q9ULC4 181 aaKnown RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 FKBP7Q9Y680 259 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 PCNX1Q96RV3 2341 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 A0A0B4J203 849 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 C10orf142B7Z368 130 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 PDCD5O14737 125 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 BGLAPP02818 100 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 SPINK2P20155 84 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 ZNF45Q02386 682 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 TPBGQ13641 420 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 SLC35D3Q5M8T2 416 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 RPL22L1Q6P5R6 122 aaKnown RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 OR13C3Q8NGS6 347 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 DDA1Q9BW61 102 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 PARD6AQ9NPB6 346 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 QPCTLQ9NXS2 382 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 CCDC59Q9P031 241 aaKnown RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 COPS3Q9UNS2 423 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 PCNX3Q9H6A9 2034 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 TMEM131Q92545 1883 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 LYPD3O95274 346 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 FARS2O95363 451 aaKnown RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 WISP1O95388 367 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 MST1P26927 711 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 CD96P40200 585 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 PLPPR5Q32ZL2 321 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 CNIH2Q6PI25 160 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 TMEM106AQ96A25 262 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 NKX3-1Q99801 234 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-213ENST00000620219 WACQ9BTA9 647 aa14.12□□□□□ -0.15
CPSF1-213ENST00000620219 NOX4Q9NPH5 578 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms