RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TRAV18	A0A075B6X5	111 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	CSN2	P05814	226 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	GTF2F2	P13984	249 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	CCKBR	P32239	447 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	MECP2	P51608	486 aa	Known RBP	13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	ALKBH1	Q13686	389 aa	Known RBP	13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	C4orf46	Q504U0	113 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	MRGPRX1	Q96LB2	322 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	G6PC3	Q9BUM1	346 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF426	Q9BUY5	554 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DNTTIP1	Q9H147	329 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	FANCF	Q9NPI8	374 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644		A0A1B0GW55	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	C17orf51	A8MQB3	221 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	ACOT7	O00154	380 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	CLDN4	O14493	209 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	OIP5	O43482	229 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4L2	P0CJ85	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4L3	P0CJ86	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4L4	P0CJ87	422 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4L5	P0CJ88	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4L6	P0CJ89	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4L7	P0CJ90	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	RNH1	P13489	461 aa	Known RBP	13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	ADRA2C	P18825	462 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	GMFB	P60983	142 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	SORD	Q00796	357 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	MED25	Q71SY5	747 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	TMED4	Q7Z7H5	227 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	OR2AK2	Q8NG84	335 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	OR4D10	Q8NGI6	311 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	OR8D2	Q9GZM6	311 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	COMMD4	Q9H0A8	199 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	OR10A5	Q9H207	317 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	ESRP2	Q9H6T0	727 aa	Known RBP	13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	SOHLH2	Q9NX45	425 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DUX4	Q9UBX2	424 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	NDRG3	Q9UGV2	375 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	MRM2	Q9UI43	246 aa	Known RBP	13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	DOCK8	Q8NF50	2099 aa		13.14	□□□□□ -0.31
SMTN-223	ENST00000619644	TNF	P01375	233 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	PBX2	P40425	430 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	SCRN3	Q0VDG4	424 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	SCARF2	Q96GP6	870 aa	Predicted RBP	13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	VSTM2L	Q96N03	204 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	MFRP	Q9BY79	579 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF768	Q9H5H4	540 aa	Known RBP	13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	ZMAT3	Q9HA38	289 aa	Known RBP	13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	OBP2A	Q9NY56	170 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	DENND4A	Q7Z401	1863 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	LOC100509620	A0A075B734	347 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644		F8W036	122 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	ACHE	P22303	614 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	AKT2	P31751	481 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	PRPS1	P60891	318 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	BIK	Q13323	160 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	CD226	Q15762	336 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	HFE	Q30201	348 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	TMEM88	Q6PEY1	159 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	TMEM17	Q86X19	198 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	PPP1R14A	Q96A00	147 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	PBX4	Q9BYU1	374 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	NRSN2	Q9GZP1	204 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	ICAM5	Q9UMF0	924 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	KCNK7	Q9Y2U2	307 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	CT45A8	P0DMV1	189 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	CT45A9	P0DMV2	189 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	S1PR1	P21453	382 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	MAP3K8	P41279	467 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	CT45A2	Q5DJT8	189 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC36A1	Q7Z2H8	476 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF227	Q86WZ6	799 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	DND1	Q8IYX4	353 aa	Known RBP	13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	NKD1	Q969G9	470 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	ADO	Q96SZ5	270 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	GAS2L1	Q99501	681 aa	Predicted RBP	13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	POLE3	Q9NRF9	147 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	COA4	Q9NYJ1	87 aa		13.13	□□□□□ -0.31
SMTN-223	ENST00000619644	TCRBV21S2A2	A0A5A6	115 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	OR6A2	O95222	327 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	EFNB2	P52799	333 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	ZNF627	Q7L945	461 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	SLC25A28	Q96A46	364 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	HAVCR1	Q96D42	359 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	MTIF3	Q9H2K0	278 aa	Known RBP	13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	BARX1	Q9HBU1	254 aa	Predicted RBP	13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	PRSS44	E7EML9	344 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	C5orf67	F2Z3F1	127 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	SCD	O00767	359 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	SULT1B1	O43704	296 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	CD14	P08571	375 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	H2AFB1	P0C5Y9	115 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	LIPC	P11150	499 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	RPA2	P15927	270 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	S100A12	P80511	92 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	TSSK4	Q6SA08	328 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	MUC20	Q8N307	709 aa	Predicted RBP	13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	PLPP7	Q8NBV4	271 aa		13.12	□□□□□ -0.31
SMTN-223	ENST00000619644	OR51S1	Q8NGJ8	323 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms