RNA–Protein interactions for RNA: ENST00000614932.1

VPS39-214, Transcript of VPS39, HOPS complex subunit, humanhuman

Gene VPS39, Length 2,835 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39-214ENST00000614932 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.33□□□□□ -0.92
VPS39-214ENST00000614932 ABLIM2Q6H8Q1 611 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 BAP18Q8IXM2 172 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 OR4K15Q8NH41 348 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 FGF11Q92914 225 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 HIST1H2BHQ93079 126 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 RRNAD1Q96FB5 475 aaKnown RBP9.33□□□□□ -0.92
VPS39-214ENST00000614932 PIK3IP1Q96FE7 263 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 ADGRG7Q96K78 797 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 FAM210BQ96KR6 192 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 MRGPRX3Q96LB0 322 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 APOLD1Q96LR9 279 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 CCDC74BQ96LY2 380 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 NRTNQ99748 197 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 HIST1H2BNQ99877 126 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 HIST1H2BMQ99879 126 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 SLITRK2Q9H156 845 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 TRPV4Q9HBA0 871 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 TAS2R10Q9NYW0 307 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 KLK11Q9UBX7 282 aa9.33□□□□□ -0.92
VPS39-214ENST00000614932 ZNF230Q9UIE0 474 aaPredicted RBP9.33□□□□□ -0.92
VPS39-214ENST00000614932 MRPS23Q9Y3D9 190 aaKnown RBP9.33□□□□□ -0.92
VPS39-214ENST00000614932 SLC5A10A0PJK1 596 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 PRRT4C9JH25 899 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 K7ESM1 405 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 OR10H3O60404 316 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 CLDN9O95484 217 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 C8GP07360 202 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 CD14P08571 375 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 PPIBP23284 216 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 AOAHP28039 575 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 DVL1P1P54792 670 aaPredicted RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 RAB1AP62820 205 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 RHEBQ15382 184 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 RGNQ15493 299 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 LY6G6FQ5SQ64 297 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 FAM27D1Q5T7N8 215 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 GGNBP1Q5YKI7 109 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 NCR3LG1Q68D85 454 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 VHLLQ6RSH7 139 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 CXXC5Q7LFL8 322 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 ZNF573Q86YE8 665 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 OR2L3Q8NG85 312 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 OR1J1Q8NGS3 322 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 OTUB2Q96DC9 234 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 RSPRY1Q96DX4 576 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 SAT2Q96F10 170 aaPredicted RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 APIPQ96GX9 242 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 MICU1Q9BPX6 476 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ACTR3CQ9C0K3 210 aaPredicted RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 GPATCH2Q9NW75 528 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 TRPC4Q9UBN4 977 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 KCNE5Q9UJ90 142 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 GNG8Q9UK08 70 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 TMEM269A0A1B0GVZ9 245 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ZNF749O43361 778 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 EPHA1P21709 976 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 RBM34P42696 430 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 TAF13Q15543 124 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 VWA2Q5GFL6 755 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 EIF5AL1Q6IS14 154 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 NDUFAF7Q7L592 441 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ARL14Q8N4G2 192 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 INO80EQ8NBZ0 244 aaPredicted RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 MRGPRDQ8TDS7 321 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 TMED6Q8WW62 240 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 EXTL1Q92935 676 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 MR1Q95460 341 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 DTD2Q96FN9 168 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 THOC3Q96J01 351 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 DIRC2Q96SL1 478 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ORAI3Q9BRQ5 295 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 IL20RAQ9UHF4 553 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 POMT1Q9Y6A1 747 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 A0A087WZY1 265 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 F8VVB4 439 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 F8VWA3 439 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ADAP1O75689 374 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 GBAP04062 536 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 DCTDP32321 178 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 DGKGP49619 791 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 NAAAQ02083 359 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 CHIT1Q13231 466 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ATXN7L3Q14CW9 347 aaPredicted RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 ZNF674Q2M3X9 581 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ZNF774Q6NX45 483 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 PPCDCQ96CD2 204 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 YPEL4Q96NS1 127 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 URM1Q9BTM9 101 aaKnown RBP9.32□□□□□ -0.92
VPS39-214ENST00000614932 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ZNF350Q9GZX5 532 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 ATG5Q9H1Y0 275 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 CBLN4Q9NTU7 201 aa9.32□□□□□ -0.92
VPS39-214ENST00000614932 KIAA1671Q9BY89 1806 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms