RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RTN4RQ9BZR6 473 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 EVA1AQ9H8M9 152 aa18.5■□□□□ 0.55
SSBP3-216ENST00000610401 TICRRQ7Z2Z1 1910 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 LINC01565O15544 149 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 F12P00748 615 aaPredicted RBP18.49■□□□□ 0.55
SSBP3-216ENST00000610401 S1PR1P21453 382 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 SKP1P63208 163 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 MESTQ5EB52 335 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 STEAP1BQ6NZ63 245 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 LRRTM1Q86UE6 522 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 OOSP2Q86WS3 158 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 LHFPL5Q8TAF8 219 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 SCARB1Q8WTV0 552 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 FAM3DQ96BQ1 224 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 ZNF426Q9BUY5 554 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 ZCCHC4Q9H5U6 513 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 SYNDIG1Q9H7V2 258 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 B9D1Q9UPM9 204 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 HRH3Q9Y5N1 445 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 A0A087WV62 115 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 EEF1E1-BLOC1S5C9J1V9 151 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 PLRG1O43660 514 aaKnown RBP18.49■□□□□ 0.55
SSBP3-216ENST00000610401 TACR3P29371 465 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 FAUP35544 74 aaKnown RBP18.49■□□□□ 0.55
SSBP3-216ENST00000610401 MOGAT2Q3SYC2 334 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 NKAIN2Q5VXU1 208 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 OR52W1Q6IF63 320 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 OR13H1Q8NG92 308 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 BAHD1Q8TBE0 780 aaPredicted RBP18.49■□□□□ 0.55
SSBP3-216ENST00000610401 SPACA5Q96QH8 159 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 PRR13Q9NZ81 148 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 STEAP1Q9UHE8 339 aa18.49■□□□□ 0.55
SSBP3-216ENST00000610401 C13orf42A0A1B0GVH6 325 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 NAP1L6A6NFF2 107 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 CDC40O60508 579 aaKnown RBP eCLIP18.48■□□□□ 0.55
SSBP3-216ENST00000610401 SLC16A7O60669 478 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 OPN1LWP04000 364 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 RAB40ALP0C0E4 278 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 GMFBP60983 142 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 OR7A5Q15622 319 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 ARMC6Q6NXE6 501 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 RAB40AQ8WXH6 277 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 OR10A5Q9H207 317 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 EXOSC3Q9NQT5 275 aaKnown RBP18.48■□□□□ 0.55
SSBP3-216ENST00000610401 PRTFDC1Q9NRG1 225 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 KIF25Q9UIL4 384 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 C2orf74A8MZ97 194 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 RAB3DO95716 219 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 CD14P08571 375 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 RPL35P42766 123 aaKnown RBP18.48■□□□□ 0.55
SSBP3-216ENST00000610401 LINC00346Q8IVM7 164 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 IQCF2Q8IXL9 164 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 GVQW1Q8N7I0 195 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 STEAP2Q8NFT2 490 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 GPR148Q8TDV2 347 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 LRRC46Q96FV0 321 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 RADILQ96JH8 1075 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 VSTM2LQ96N03 204 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 TSPAN32Q96QS1 320 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 PBX4Q9BYU1 374 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 SLCO1B1Q9Y6L6 691 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 H7C417 338 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 TOR1AO14656 332 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 SLC35E2P0CK97 266 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 AVPR2P30518 371 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 ZNF273Q14593 569 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 CORO6Q6QEF8 472 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 SHISA6Q6ZSJ9 500 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 TMEM185AQ8NFB2 350 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 OR52H1Q8NGJ2 320 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 TAAR8Q969N4 342 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 MARC2Q969Z3 335 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 PNPLA2Q96AD5 504 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 CTHRC1Q96CG8 243 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 TMEM231Q9H6L2 316 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 TAS2R4Q9NYW5 299 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 MTFP1Q9UDX5 166 aa18.48■□□□□ 0.55
SSBP3-216ENST00000610401 UNC13CQ8NB66 2214 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 OR4C45A6NMZ5 311 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 NFATC4Q14934 902 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 SLC16A9Q7RTY1 509 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 SPICQ8N5J4 248 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 BVESQ8NE79 360 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 MRPL48Q96GC5 212 aaKnown RBP18.47■□□□□ 0.55
SSBP3-216ENST00000610401 XRCC3O43542 346 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 TMEM240Q5SV17 173 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 C3orf33Q6P1S2 294 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 SLC36A1Q7Z2H8 476 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 GPR119Q8TDV5 335 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 LYRM4Q9HD34 91 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 CENPMQ9NSP4 180 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 TMEM184BQ9Y519 407 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-216ENST00000610401 PCNX3Q9H6A9 2034 aa18.47■□□□□ 0.55
SSBP3-216ENST00000610401 CTRB1P17538 263 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 KIR3DL2P43630 455 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 OR1D4P47884 311 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 EGR4Q05215 589 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 MFGE8Q08431 387 aaPredicted RBP18.46■□□□□ 0.55
SSBP3-216ENST00000610401 ELFN2Q5R3F8 820 aa18.46■□□□□ 0.55
SSBP3-216ENST00000610401 CTRB2Q6GPI1 263 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms