RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TP53TG5Q9Y2B4 290 aa16■□□□□ 0.15
VRK3-225ENST00000601912 FLVCR1Q9Y5Y0 555 aa16■□□□□ 0.15
VRK3-225ENST00000601912 ZNF670-ZNF695F2Z2N8 137 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 AQP7O14520 342 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 GPR171O14626 319 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 CRYABP02511 175 aaKnown RBP15.99■□□□□ 0.15
VRK3-225ENST00000601912 LIPAP38571 399 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 CSNK1A1P48729 337 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 RGS6P49758 472 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 HCCSP53701 268 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 ACTA2P62736 377 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 ACTG2P63267 376 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 ZNF85Q03923 595 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 UNQ6494/PRO21346Q6UXR6 183 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 OR6N2Q8NGY6 317 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 SPRYD4Q8WW59 207 aaPredicted RBP15.99■□□□□ 0.15
VRK3-225ENST00000601912 NSMAFQ92636 917 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 SARAFQ96BY9 339 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 WDR76Q9H967 626 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 GLTPQ9NZD2 209 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 TMEM14AQ9Y6G1 99 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 FRYQ5TBA9 3013 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 CCRL2O00421 344 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 MT-ND5P03915 603 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 C3AR1Q16581 482 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 HIST3H3Q16695 136 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 TSTQ16762 297 aaKnown RBP15.99■□□□□ 0.15
VRK3-225ENST00000601912 PLEKHN1Q494U1 663 aaPredicted RBP15.99■□□□□ 0.15
VRK3-225ENST00000601912 P2RY8Q86VZ1 359 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 SIAH3Q8IW03 269 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 GLB1L2Q8IW92 636 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 RNF128Q8TEB7 428 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 ABHD3Q8WU67 409 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 RAB2BQ8WUD1 216 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 SNX33Q8WV41 574 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 MCHR2Q969V1 340 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 ISOC1Q96CN7 298 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 NMD3Q96D46 503 aaKnown RBP15.99■□□□□ 0.15
VRK3-225ENST00000601912 OPALINQ96PE5 141 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 EMC3Q9P0I2 261 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 LAMP5Q9UJQ1 280 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 LHX6Q9UPM6 363 aa15.99■□□□□ 0.15
VRK3-225ENST00000601912 DMXL2Q8TDJ6 3036 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 IGKV3D-15A0A087WSY6 115 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ZNF593O00488 134 aaPredicted RBP15.98■□□□□ 0.15
VRK3-225ENST00000601912 PHYHO14832 338 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ZNF432O94892 652 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 GPANK1O95872 356 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 QDPRP09417 244 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ZNF823P16415 610 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 PTGS2P35354 604 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ADAM8P78325 824 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ACSM1Q08AH1 577 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 RNPS1Q15287 305 aaKnown RBP15.98■□□□□ 0.15
VRK3-225ENST00000601912 AAED1Q7RTV5 226 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 CDC20BQ86Y33 519 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 TMEM123Q8N131 208 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ZNF485Q8NCK3 441 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 FNDC9Q8TBE3 224 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 TMEM54Q969K7 222 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 ZNF775Q96BV0 537 aaPredicted RBP15.98■□□□□ 0.15
VRK3-225ENST00000601912 FOXN4Q96NZ1 517 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 PLSCR2Q9NRY7 297 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 BABAM2Q9NXR7 383 aa15.98■□□□□ 0.15
VRK3-225ENST00000601912 PTPRQQ9UMZ3 2332 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 IGKV1D-43A0A0B4J1Z2 117 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 SLC43A1O75387 559 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 HRGP04196 525 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 TGFBR2P37173 567 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 CD79BP40259 229 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 SELENOPP49908 381 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 SLC25A47Q6Q0C1 308 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 DPY19L4Q7Z388 723 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 MCEMP1Q8IX19 187 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 SYS1Q8N2H4 156 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 SLC26A10Q8NG04 563 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 ZCCHC14Q8WYQ9 949 aaKnown RBP15.97■□□□□ 0.15
VRK3-225ENST00000601912 C4orf36Q96KX1 117 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 PRDM14Q9GZV8 571 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 NAA50Q9GZZ1 169 aaKnown RBP15.97■□□□□ 0.15
VRK3-225ENST00000601912 ISG20L2Q9H9L3 353 aaKnown RBP15.97■□□□□ 0.15
VRK3-225ENST00000601912 TRIM36Q9NQ86 728 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 MRPL22Q9NWU5 206 aaKnown RBP15.97■□□□□ 0.15
VRK3-225ENST00000601912 ENPP5Q9UJA9 477 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 COPS3Q9UNS2 423 aa15.97■□□□□ 0.15
VRK3-225ENST00000601912 J3QLW9 94 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 TAF4O00268 1085 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 TMCC2O75069 709 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 CPEP16870 476 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 ZNF19P17023 458 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 LAP3P28838 519 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 GUCA1AP43080 201 aaPredicted RBP15.96■□□□□ 0.15
VRK3-225ENST00000601912 ENTPD1P49961 510 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 BDH1Q02338 343 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 CDONQ4KMG0 1287 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 LRFN4Q6PJG9 635 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 SSX6Q7RTT6 188 aa15.96■□□□□ 0.15
VRK3-225ENST00000601912 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.96■□□□□ 0.15
VRK3-225ENST00000601912 KLBQ86Z14 1044 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms