RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 BGLAPP02818 100 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 CD55P08174 381 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 MYZAPP0CAP1 466 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 LBPP18428 481 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 HTR2AP28223 471 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 APLNRP35414 380 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 MVDP53602 400 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 BIDP55957 195 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 SEC61A1P61619 476 aaKnown RBP8.53□□□□□ -1.04
TRIM28-210ENST00000597618 BTG1P62324 171 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 TAF9Q16594 264 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 ZNF718Q3SXZ3 478 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 NRN1LQ496H8 165 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 FAM91A1Q658Y4 838 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 ASPHD2Q6ICH7 369 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 ULK3Q6PHR2 472 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 BTNL3Q6UXE8 466 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 UNQ6126/PRO20091Q6UXV3 157 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 WDR88Q6ZMY6 472 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 JAZF1Q86VZ6 243 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 OR4K5Q8NGD3 323 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 OR6X1Q8NH79 312 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 UBLCP1Q8WVY7 318 aaPredicted RBP8.53□□□□□ -1.04
TRIM28-210ENST00000597618 IPCEF1Q8WWN9 437 aaPredicted RBP8.53□□□□□ -1.04
TRIM28-210ENST00000597618 GEMIN6Q8WXD5 167 aaKnown RBP8.53□□□□□ -1.04
TRIM28-210ENST00000597618 ANP32BQ92688 251 aaKnown RBP8.53□□□□□ -1.04
TRIM28-210ENST00000597618 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 UPRTQ96BW1 309 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 SLC47A1Q96FL8 570 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 RHOXF2Q9BQY4 288 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 SLC30A2Q9BRI3 323 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 TMEM106BQ9NUM4 274 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 C1RLQ9NZP8 487 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 SELENONQ9NZV5 590 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 LRCH1Q9Y2L9 728 aa8.53□□□□□ -1.04
TRIM28-210ENST00000597618 TRAV40A0A0B4J280 105 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 MDFIC2A0A1B0GVS7 189 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 F5H0A9 414 aaPredicted RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 H3BSA7 217 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 DHHO43323 396 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 BPGMP07738 259 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 SELEP16581 610 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 CCNOP22674 350 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 CD80P33681 288 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 MPV17P39210 176 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 NME5P56597 212 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 RPL15P61313 204 aaKnown RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 NCALDP61601 193 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 RELBQ01201 579 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 HSF2Q03933 536 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 HLXQ14774 488 aaPredicted RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 SPATA46Q5T0L3 261 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 MBNL2Q5VZF2 373 aaKnown RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 FIP1L1Q6UN15 594 aaKnown RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 LRRC28Q86X40 367 aaPredicted RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 C1orf174Q8IYL3 243 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 TMEM86BQ8N661 226 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 C10orf53Q8N6V4 93 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 ZNF781Q8N8C0 355 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 BBS10Q8TAM1 723 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 TCP10LQ8TDR4 215 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 ZNF566Q969W8 418 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 MARS2Q96GW9 593 aaKnown RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 TEX37Q96LM6 180 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 MOGAT1Q96PD6 335 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 DCLRE1CQ96SD1 692 aaKnown RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 ZBTB18Q99592 522 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 SLC19A3Q9BZV2 496 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 PRDM13Q9H4Q3 707 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 NANOGQ9H9S0 305 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 A4GALTQ9NPC4 353 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 NOX4Q9NPH5 578 aa8.52□□□□□ -1.05
TRIM28-210ENST00000597618 EIF3KQ9UBQ5 218 aaKnown RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 SOX21Q9Y651 276 aaPredicted RBP8.52□□□□□ -1.05
TRIM28-210ENST00000597618 PIN1P1O15428 100 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 SPAG7O75391 227 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 ERLIN1O75477 346 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 OR6A2O95222 327 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 ANP32DO95626 131 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 TSPAN15O95858 294 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 MT-ATP6P00846 226 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 ADORA3P0DMS8 318 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 CPT2P23786 658 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 STOMP27105 288 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 PRKAR1BP31321 381 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 MDH2P40926 338 aaKnown RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 UFM1P61960 85 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 TNFAIP6P98066 277 aaPredicted RBP8.51□□□□□ -1.05
TRIM28-210ENST00000597618 ZMYND11Q15326 602 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 TMEM255AQ5JRV8 349 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 THEM4Q5T1C6 240 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 OGFOD2Q6N063 350 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 LRFN4Q6PJG9 635 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 SLC35D2Q76EJ3 337 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 ZNF101Q8IZC7 436 aa8.51□□□□□ -1.05
TRIM28-210ENST00000597618 KIRREL3Q8IZU9 778 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms