RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 SNX33Q8WV41 574 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 DYDC1Q8WWB3 177 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 C11orf40Q8WZ69 217 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 MCHR2Q969V1 340 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 SEPHS2Q99611 448 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 PRSS27Q9BQR3 290 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 BCL2L14Q9BZR8 327 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 MEPEQ9NQ76 525 aaPredicted RBP20.44■□□□□ 0.86
LSM4-202ENST00000593564 NKIRAS2Q9NYR9 191 aa20.44■□□□□ 0.86
LSM4-202ENST00000593564 CENPBD1B2RD01 187 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 VENTXO95231 258 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 LCKP06239 509 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 RAD52P43351 418 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 UCP2P55851 309 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 RUNX1T1Q06455 604 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 NFYCQ13952 458 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 TMEM154Q6P9G4 183 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 RBM15BQ8NDT2 890 aaKnown RBP20.43■□□□□ 0.86
LSM4-202ENST00000593564 SLC26A7Q8TE54 656 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 RASSF5Q8WWW0 418 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 ATP6V1G3Q96LB4 118 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 TSPAN32Q96QS1 320 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 ZNF347Q96SE7 839 aa20.43■□□□□ 0.86
LSM4-202ENST00000593564 MRPL13Q9BYD1 178 aaKnown RBP20.43■□□□□ 0.86
LSM4-202ENST00000593564 TRAV20A0A0B4J274 112 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 BLOC1S5-TXNDC5H3BN57 136 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 MGRN1O60291 552 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 ZNF84P51523 738 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 CRYBA2P53672 197 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 ERVS71-1P61550 626 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 CCL8P80075 99 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 MYBPC1Q00872 1141 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 SHQ1Q6PI26 577 aaKnown RBP20.42■□□□□ 0.86
LSM4-202ENST00000593564 HDDC2Q7Z4H3 204 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 NOXO1Q8NFA2 376 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 OR10A6Q8NH74 314 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 LRMDAQ9H2I8 198 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 OR51B6Q9H340 312 aa20.42■□□□□ 0.86
LSM4-202ENST00000593564 IQCMA0A1B0GVH7 501 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 A0A1W2PRG6 482 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 MMP7P09237 267 aaPredicted RBP20.41■□□□□ 0.86
LSM4-202ENST00000593564 ZNF133P52736 654 aaPredicted RBP20.41■□□□□ 0.86
LSM4-202ENST00000593564 PLP2Q04941 152 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 RPL18Q07020 188 aaKnown RBP20.41■□□□□ 0.86
LSM4-202ENST00000593564 VMACQ2NL98 169 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 TTMPQ5BVD1 217 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 CCDC80Q76M96 950 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 ASB10Q8WXI3 467 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 TENM1Q9UKZ4 2725 aa20.41■□□□□ 0.86
LSM4-202ENST00000593564 MCIDASD6RGH6 385 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 CDC14BO60729 498 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 PNPP00491 289 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 MT-ND1P03886 318 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 ANPEPP15144 967 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 RBM34P42696 430 aaKnown RBP20.4■□□□□ 0.86
LSM4-202ENST00000593564 CRYBB2P43320 205 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 GZMMP51124 257 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 DAP3P51398 398 aaKnown RBP20.4■□□□□ 0.86
LSM4-202ENST00000593564 UGT2B15P54855 530 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 TEKQ02763 1124 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 MOGQ16653 247 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 C10orf128Q5T292 105 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 C12orf54Q6X4T0 127 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 TEX29Q8N6K0 151 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 SYT14Q8NB59 555 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 ZNF665Q9H7R5 613 aa20.4■□□□□ 0.86
LSM4-202ENST00000593564 TRMUO75648 421 aaKnown RBP20.39■□□□□ 0.85
LSM4-202ENST00000593564 IGF2P01344 180 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 F13BP05160 661 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 ACADSP16219 412 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 APLNRP35414 380 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 ACSM5Q6NUN0 579 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 FAHD2BQ6P2I3 314 aaPredicted RBP20.39■□□□□ 0.85
LSM4-202ENST00000593564 LRRC18Q8N456 261 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 ZNF418Q8TF45 676 aaPredicted RBP20.39■□□□□ 0.85
LSM4-202ENST00000593564 THOC1Q96FV9 657 aaKnown RBP20.39■□□□□ 0.85
LSM4-202ENST00000593564 FAHD2AQ96GK7 314 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 NANOGQ9H9S0 305 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 SIAEQ9HAT2 523 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 G6PC2Q9NQR9 355 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 INIPQ9NRY2 104 aa20.39■□□□□ 0.85
LSM4-202ENST00000593564 INTS9Q9NV88 658 aaKnown RBP20.39■□□□□ 0.85
LSM4-202ENST00000593564 STX18Q9P2W9 335 aaKnown RBP20.39■□□□□ 0.85
LSM4-202ENST00000593564 IGHV1-69-2A0A0G2JMI3 117 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 OR7A10O76100 309 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 IGHV3-13P01766 116 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 MT-ND5P03915 603 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 FUT1P19526 365 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 MRPS34P82930 218 aaKnown RBP20.38■□□□□ 0.85
LSM4-202ENST00000593564 HSF2Q03933 536 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 PABPC1L2AQ5JQF8 200 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 AVPI1Q5T686 147 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 NKAIN4Q8IVV8 208 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 ICA1LQ8NDH6 482 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 CPEB3Q8NE35 698 aaKnown RBP20.38■□□□□ 0.85
LSM4-202ENST00000593564 PFN4Q8NHR9 129 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 RAB39BQ96DA2 213 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 SGTBQ96EQ0 304 aa20.38■□□□□ 0.85
LSM4-202ENST00000593564 POLR2J2Q9GZM3 115 aaKnown RBP20.38■□□□□ 0.85
LSM4-202ENST00000593564 POLR2J3Q9H1A7 115 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms