RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	TBC1D3H	P0C7X1	549 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	PTGFR	P43088	359 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	PNLIPRP2	P54317	469 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	PDZK1IP1	Q13113	114 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	DHRS2	Q13268	280 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	ALKBH1	Q13686	389 aa	Known RBP	13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	TBC1D3C	Q6IPX1	549 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	ZNF425	Q6IV72	752 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	PARM1	Q6UWI2	310 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	VN1R4	Q7Z5H5	301 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	OR4N5	Q8IXE1	308 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	MFSD9	Q8NBP5	474 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	OR51D1	Q8NGF3	324 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	OR1J2	Q8NGS2	313 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	GPX8	Q8TED1	209 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	PPP1R1C	Q8WVI7	109 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	POTEKP	Q9BYX7	375 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	NMNAT2	Q9BZQ4	307 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	FRRS1L	Q9P0K9	344 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	FBXO4	Q9UKT5	387 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	ENTPD2	Q9Y5L3	495 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-222	ENST00000592546		K7EQS6	105 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	FADS1	O60427	444 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	OR8G3P	P0DMU2	310 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	NR0B2	Q15466	257 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	INPP5J	Q15735	1006 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	LIN54	Q6MZP7	749 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	RD3	Q7Z3Z2	195 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	SKA3	Q8IX90	412 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	CCL4L1	Q8NHW4	92 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	FGF14	Q92915	247 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	ZNF251	Q9BRH9	671 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	LMAN2L	Q9H0V9	348 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	TINAG	Q9UJW2	476 aa		13.11	□□□□□ -0.31
RFX2-222	ENST00000592546	OR2AT4	A6NND4	320 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	SMAD9	O15198	467 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	CMPK1	P30085	196 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	RBM34	P42696	430 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	KIR2DL1	P43626	348 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ATP1B3	P54709	279 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	TRMT12	Q53H54	448 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	EXOSC6	Q5RKV6	272 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	LINC01590	Q5TEZ4	76 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ZNF776	Q68DI1	518 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	LCN9	Q8WX39	176 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ARL11	Q969Q4	196 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	SEC22A	Q96IW7	307 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	PTCHD1	Q96NR3	888 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	MNT	Q99583	582 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	PTDSS2	Q9BVG9	487 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	SEC11C	Q9BY50	192 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	TMEM74B	Q9NUR3	256 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	FBXL21	Q9UKT6	434 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	TRBV5-7	A0A0A0MS05	114 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546		H0Y8X5	98 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	CCS	O14618	274 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	RDH16	O75452	317 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ZNF888	P0CJ79	500 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	CD79A	P11912	226 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ABO	P16442	354 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	CD34	P28906	385 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	POU3F4	P49335	361 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	TAS2R19	P59542	299 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ACTB	P60709	375 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ACTG1	P63261	375 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ZNF600	Q6ZNG1	722 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	SLC16A13	Q7RTY0	426 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	OR4A4P	Q8NGN8	299 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ELP5	Q8TE02	316 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	MYADM	Q96S97	322 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	ADAP2	Q9NPF8	381 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	TMEM100	Q9NV29	134 aa		13.1	□□□□□ -0.31
RFX2-222	ENST00000592546	LDB3	O75112	727 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	GLCE	O94923	617 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	RAB3D	O95716	219 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	S100A8	P05109	93 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	TACSTD2	P09758	323 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	CAPZA1	P52907	286 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	ADPRH	P54922	357 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	SNRPE	P62304	92 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	RAB30	Q15771	203 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	FIGNL1	Q6PIW4	674 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	UNQ6126/PRO20091	Q6UXV3	157 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	COX18	Q8N8Q8	333 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	OR5AP2	Q8NGF4	316 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	ZNF417	Q8TAU3	575 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	RBM18	Q96H35	190 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	CNTNAP3B	Q96NU0	1288 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	DZANK1	Q9NVP4	752 aa		13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	MRM2	Q9UI43	246 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	CDV3	Q9UKY7	258 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	NOP16	Q9Y3C1	178 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-222	ENST00000592546	SPTB	P11277	2137 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms