RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 KCNK17Q96T54 332 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 ULBP2Q9BZM5 246 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 GRHPRQ9UBQ7 328 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 HRNRQ86YZ3 2850 aaPredicted RBP18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 NSD1Q96L73 2696 aaPredicted RBP18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 A0A1W2PR80 420 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 BHLHE40O14503 412 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 SOCS2O14508 198 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 MITFO75030 526 aaPredicted RBP18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 SLC2A10O95528 541 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 QDPRP09417 244 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 ANXA8P13928 327 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 GSTM3P21266 225 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 ARHGDIAP52565 204 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 ARF1P84077 181 aaKnown RBP18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 SLC36A3Q495N2 470 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 Q5PR19 223 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 PTCHD4Q6ZW05 846 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 HIPK1Q86Z02 1210 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 C10orf67Q8IYJ2 551 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 LRRC75A-AS1Q8N1F1 130 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 OR4Q3Q8NH05 313 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 MAGEE2Q8TD90 523 aaPredicted RBP18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 HTRA1Q92743 480 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 MCHR2Q969V1 340 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 HDHD5Q9BXW7 423 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 NELFAQ9H3P2 528 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 TBC1D23Q9NUY8 699 aa18.8■□□□□ 0.6
R3HDM4-206ENST00000590454 A0A096LPE4 126 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 A0A1W2PPZ6 126 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 CIB4A0PJX0 185 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 SH3D21A4FU49 640 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 H7C1Q1 480 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 TXNDC12O95881 172 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 SDHAP31040 664 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 CDKN2AP42771 156 aaKnown RBP18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 COX10Q12887 443 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 KRR1Q13601 381 aaKnown RBP18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 HIKESHIQ53FT3 197 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 SLC35F1Q5T1Q4 408 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 ZDHHC13Q8IUH4 622 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 CIARTQ8N365 385 aaPredicted RBP18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 IQCF1Q8N6M8 205 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 STEAP2Q8NFT2 490 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 OR1K1Q8NGR3 316 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 STMN2Q93045 179 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 DACH2Q96NX9 599 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 MUS81Q96NY9 551 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 TSSK6Q9BXA6 273 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 NDEL1Q9GZM8 345 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 GABARAPL1Q9H0R8 117 aa18.79■□□□□ 0.6
R3HDM4-206ENST00000590454 A6NIZ1 184 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 HIST1H1CP16403 213 aaKnown RBP18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 RPS6KA3P51812 740 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 RAP1BP61224 184 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 RAP1AP62834 184 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 ELF3P78545 371 aaPredicted RBP18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 PPP2R2BQ00005 443 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 CD47Q08722 323 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 TAB1Q15750 504 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 STK11Q15831 433 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 FAM205BPQ63HN1 556 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 GPR139Q6DWJ6 353 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 ALKBH2Q6NS38 261 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 ABHD12BQ7Z5M8 362 aaPredicted RBP18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 PQLC1Q8N2U9 271 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 SVOPLQ8N434 492 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 WDR31Q8NA23 367 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 BCL2L2Q92843 193 aaPredicted RBP18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 MED18Q9BUE0 208 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 ZNF556Q9HAH1 456 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 B3GAT2Q9NPZ5 323 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 KIF17Q9P2E2 1029 aa18.78■□□□□ 0.6
R3HDM4-206ENST00000590454 A0A1W2PPR1 153 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 SLC22A23A1A5C7 686 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 OR5H1A6NKK0 313 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 ARPC3O15145 178 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 DHHO43323 396 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 SMPD2O60906 423 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 BAG2O95816 211 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 APEHP13798 732 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 POU1F1P28069 291 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 RPL13AP3Q6NVV1 102 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 SLC25A47Q6Q0C1 308 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 SEZ6L2Q6UXD5 910 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 HDDC2Q7Z4H3 204 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 OR52L1Q8NGH7 329 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 OR4K13Q8NH42 304 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 NSMAFQ92636 917 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 CIB1Q99828 191 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 ALG12Q9BV10 488 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 PAPOLBQ9NRJ5 636 aaKnown RBP18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 TMEFF2Q9UIK5 374 aaPredicted RBP18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 UGT2A1Q9Y4X1 527 aa18.77■□□□□ 0.6
R3HDM4-206ENST00000590454 PRSS37A4D1T9 235 aa18.76■□□□□ 0.59
R3HDM4-206ENST00000590454 ZNF99A8MXY4 864 aaPredicted RBP18.76■□□□□ 0.59
R3HDM4-206ENST00000590454 CENPBD1B2RD01 187 aa18.76■□□□□ 0.59
R3HDM4-206ENST00000590454 H3BN98 237 aa18.76■□□□□ 0.59
R3HDM4-206ENST00000590454 SMAD7O15105 426 aaKnown RBP18.76■□□□□ 0.59
R3HDM4-206ENST00000590454 OSMP13725 252 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms