RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 KAT8Q9H7Z6 458 aaKnown RBP16.53■□□□□ 0.24
TRAF4-216ENST00000586813 TRIM33Q9UPN9 1127 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 DYSFO75923 2080 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 ANGPT2O15123 496 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 BCL10O95999 233 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 PNPP00491 289 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 PTHP01270 115 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 LCKP06239 509 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 PCGF2P35227 344 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 UCP2P55851 309 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 MYBPC1Q00872 1141 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 RUNX1T1Q06455 604 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 PCGF3Q3KNV8 242 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 MMEL1Q495T6 779 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 RBM15BQ8NDT2 890 aaKnown RBP16.52■□□□□ 0.24
TRAF4-216ENST00000586813 NOXO1Q8NFA2 376 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 C11orf40Q8WZ69 217 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 SEPHS2Q99611 448 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 PRSS27Q9BQR3 290 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 MRPL13Q9BYD1 178 aaKnown RBP16.52■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF665Q9H7R5 613 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 MEPEQ9NQ76 525 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-216ENST00000586813 SLCO1C1Q9NYB5 712 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 NKIRAS2Q9NYR9 191 aa16.52■□□□□ 0.24
TRAF4-216ENST00000586813 TANC2Q9HCD6 1990 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 IQCMA0A1B0GVH7 501 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 BLOC1S5-TXNDC5H3BN57 136 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 CFPP27918 469 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 RAD52P43351 418 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 ZNF84P51523 738 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 PLP2Q04941 152 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 RPL18Q07020 188 aaKnown RBP16.51■□□□□ 0.23
TRAF4-216ENST00000586813 AVPI1Q5T686 147 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 FAHD2BQ6P2I3 314 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-216ENST00000586813 THSD4Q6ZMP0 1018 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 OR1J2Q8NGS2 313 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 SLC26A7Q8TE54 656 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 DYDC1Q8WWB3 177 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 STON2Q8WXE9 905 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 ASB10Q8WXI3 467 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 FAHD2AQ96GK7 314 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 BCL2L14Q9BZR8 327 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 LRMDAQ9H2I8 198 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 G6PC2Q9NQR9 355 aa16.51■□□□□ 0.23
TRAF4-216ENST00000586813 IGHV1-69-2A0A0G2JMI3 117 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 A0A1W2PRG6 482 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 MCIDASD6RGH6 385 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 RGS9O75916 674 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 F13BP05160 661 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 VIMP08670 466 aaKnown RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 MMP7P09237 267 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 CRYBB2P43320 205 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 CRYBA2P53672 197 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 MVKQ03426 396 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 NFYCQ13952 458 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 INTS11Q5TA45 600 aaKnown RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 C1orf229Q6ZS94 237 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 LRRC18Q8N456 261 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 SYT14Q8NB59 555 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 ICA1LQ8NDH6 482 aa16.5■□□□□ 0.23
TRAF4-216ENST00000586813 ZNF418Q8TF45 676 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 GTF3AQ92664 365 aaKnown RBP16.5■□□□□ 0.23
TRAF4-216ENST00000586813 LOC105371242A0A075B767 164 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 CENPBD1B2RD01 187 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 TRMUO75648 421 aaKnown RBP16.49■□□□□ 0.23
TRAF4-216ENST00000586813 MT-ND1P03886 318 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 ANPEPP15144 967 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 DAP3P51398 398 aaKnown RBP16.49■□□□□ 0.23
TRAF4-216ENST00000586813 ZNF133P52736 654 aaPredicted RBP16.49■□□□□ 0.23
TRAF4-216ENST00000586813 UGT2B15P54855 530 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 TEKQ02763 1124 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 HSF2Q03933 536 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 GLO1Q04760 184 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 C10orf128Q5T292 105 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 ACSM5Q6NUN0 579 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 USP51Q70EK9 711 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 HDDC2Q7Z4H3 204 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 TEX29Q8N6K0 151 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 OR1J1Q8NGS3 322 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 OR10A6Q8NH74 314 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 PFN4Q8NHR9 129 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 RASSF5Q8WWW0 418 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 RAB39BQ96DA2 213 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 THOC1Q96FV9 657 aaKnown RBP16.49■□□□□ 0.23
TRAF4-216ENST00000586813 ATP6V1G3Q96LB4 118 aa16.49■□□□□ 0.23
TRAF4-216ENST00000586813 CLDN25C9JDP6 229 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 TPD52L2O43399 206 aaKnown RBP16.48■□□□□ 0.23
TRAF4-216ENST00000586813 DEAF1O75398 565 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-216ENST00000586813 MPZL1O95297 269 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 AVPP01185 164 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 IGHV3-13P01766 116 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 MT-ND5P03915 603 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 ACADSP16219 412 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 EPHA1P21709 976 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 DRD4P21917 467 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 APLNRP35414 380 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 GZMMP51124 257 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 ACTG1P63261 375 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 VMACQ2NL98 169 aa16.48■□□□□ 0.23
TRAF4-216ENST00000586813 PABPC1L2AQ5JQF8 200 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms