RNA–Protein interactions for RNA: ENST00000583733.1

RNF138-208, Transcript of ring finger protein 138, human

TSL 2

Gene RNF138, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF138-208	ENST00000583733	MT-ATP6	P00846	226 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	BMP2	P12643	396 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	RGS8	P57771	180 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	BST1	Q10588	318 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	FADD	Q13158	208 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	OR1Q1	Q15612	314 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	KLF17	Q5JT82	389 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	CEP85L	Q5SZL2	805 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	NXN	Q6DKJ4	435 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	DHRS4L2	Q6PKH6	230 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	MSANTD1	Q6ZTZ1	278 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	SYT14	Q8NB59	555 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	RBM15B	Q8NDT2	890 aa	Known RBP	13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	CPEB3	Q8NE35	698 aa	Known RBP	13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	NFKBID	Q8NI38	313 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	ZNF48	Q96MX3	618 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	TMEM43	Q9BTV4	400 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	EGLN1	Q9GZT9	426 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	RAD21L1	Q9H4I0	556 aa		13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	PRKDC	P78527	4128 aa	Known RBP	13.62	□□□□□ -0.23
RNF138-208	ENST00000583733	TM9SF1	O15321	606 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	QDPR	P09417	244 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	CCNO	P22674	350 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	GCH1	P30793	250 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	APLNR	P35414	380 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	CDH12	P55289	794 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	ZNF154	Q13106	437 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	SPATA46	Q5T0L3	261 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	LEG1	Q6P5S2	330 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	KRT73	Q86Y46	540 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	SLC25A44	Q96H78	314 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	SPATA5L1	Q9BVQ7	753 aa		13.61	□□□□□ -0.23
RNF138-208	ENST00000583733	TRPC5OS	A6NMA1	111 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	CLDN34	H7C241	214 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	HDAC3	O15379	428 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	RNF13	O43567	381 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	SBK2	P0C263	348 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	MDK	P21741	143 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	MMP15	P51511	669 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	POLR2J	P52435	117 aa	Known RBP	13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	HSF2	Q03933	536 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	MELK	Q14680	651 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	ZNF718	Q3SXZ3	478 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	THEM4	Q5T1C6	240 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	REEP3	Q6NUK4	255 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	LRRC18	Q8N456	261 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	OR9I1	Q8NGQ6	314 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	GEMIN6	Q8WXD5	167 aa	Known RBP	13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	MRI1	Q9BV20	369 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	PAIP1	Q9H074	479 aa	Known RBP	13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	ZIM2	Q9NZV7	527 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	SLC13A4	Q9UKG4	626 aa		13.6	□□□□□ -0.23
RNF138-208	ENST00000583733	ZSCAN5B	A6NJL1	495 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	TRAPPC2L	H3BP13	241 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	TPST2	O60704	377 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	IGHM	P01871	453 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	PGA4	P0DJD7	388 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	PGA3	P0DJD8	388 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	ZNF12	P17014	697 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	OMG	P23515	440 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	MPV17	P39210	176 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	CDK6	Q00534	326 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	HNRNPA0	Q13151	305 aa	Known RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	SLC9A3R2	Q15599	337 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	NRN1L	Q496H8	165 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	PABPC1L2A	Q5JQF8	200 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	TMEM255A	Q5JRV8	349 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	GCNT6	Q5T4J0	391 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	SWT1	Q5T5J6	900 aa	Known RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	SLC2A7	Q6PXP3	512 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	ZNF101	Q8IZC7	436 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	KLHL36	Q8N4N3	616 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	GTF2H4	Q92759	462 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	DCLRE1C	Q96SD1	692 aa	Known RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	PAIP2	Q9BPZ3	127 aa	Known RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	WFDC6	Q9BQY6	131 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	SSU72	Q9NP77	194 aa	Known RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	NPHS2	Q9NP85	383 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	TAS2R5	Q9NYW4	299 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	EGFL7	Q9UHF1	273 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	NPTN	Q9Y639	398 aa		13.59	□□□□□ -0.23
RNF138-208	ENST00000583733	PRORSD1P	A6NEY8	169 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	RGS16	O15492	202 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	CH25H	O95992	272 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	IGHG1	P01857	330 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	KIT	P10721	976 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	STOM	P27105	288 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	PCGF2	P35227	344 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	MTNR1A	P48039	350 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	ZNF84	P51523	738 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	CLRN1	P58418	232 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	MPP2	Q14168	576 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	OCLN	Q16625	522 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	KRT71	Q3SY84	523 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	SPRN	Q5BIV9	151 aa		13.58	□□□□□ -0.24
RNF138-208	ENST00000583733	HHAT	Q5VTY9	493 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms