RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	SLC25A25	Q6KCM7	469 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	H3F3C	Q6NXT2	135 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	SLC30A6	Q6NXT4	461 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	NIPAL3	Q6P499	406 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	ZNF322	Q6U7Q0	402 aa	Predicted RBP	6.63	□□□□□ -1.35
NF1-222	ENST00000582892	TMEM205	Q6UW68	189 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	FAM131A	Q6UXB0	335 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	TPRA1	Q86W33	373 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	CMIP	Q8IY22	773 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	ACBD7	Q8N6N7	88 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	COX18	Q8N8Q8	333 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	TMEM178A	Q8NBL3	297 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	MAPK1IP1L	Q8NDC0	245 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	FANK1	Q8TC84	345 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	TMEM239	Q8WW34	195 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	ZG16B	Q96DA0	208 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	DIRAS2	Q96HU8	199 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	MACROD1	Q9BQ69	325 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	LMF2	Q9BU23	707 aa	Known RBP	6.63	□□□□□ -1.35
NF1-222	ENST00000582892	ZNF426	Q9BUY5	554 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	TRIM2	Q9C040	744 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	QRSL1	Q9H0R6	528 aa	Known RBP	6.63	□□□□□ -1.35
NF1-222	ENST00000582892	OR52D1	Q9H346	318 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	PPP1R3E	Q9H7J1	279 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	ABCB9	Q9NP78	766 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	TRIM36	Q9NQ86	728 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	BABAM2	Q9NXR7	383 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	MAT2B	Q9NZL9	334 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	RABL2A	Q9UBK7	228 aa	Predicted RBP	6.63	□□□□□ -1.35
NF1-222	ENST00000582892	ZNF221	Q9UK13	617 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	SLC7A7	Q9UM01	511 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	RABL2B	Q9UNT1	228 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	SLC35A3	Q9Y2D2	325 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892	LIPG	Q9Y5X9	500 aa		6.63	□□□□□ -1.35
NF1-222	ENST00000582892		A0A0B4J2E0	115 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892		A0A1B0GX12	115 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	FAM172BP	A6NC97	362 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CCDC182	A6NF36	153 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	RIIAD1	A6NNX1	92 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	NPIPA2	E9PIF3	369 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	NPIPA3	F8WFD2	350 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892		H0YGG7	62 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	SGK494	L7N484	410 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	WWP2	O00308	870 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	GABRP	O00591	440 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CASK	O14936	926 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	FRS3	O43559	492 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CHP2	O43745	196 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TMCC2	O75069	709 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	PTP4A3	O75365	173 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CCNK	O75909	580 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	MT-ND5	P03915	603 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CSF3	P09919	207 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TBXA2R	P21731	343 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	PAICS	P22234	425 aa	Known RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	GALNS	P34059	522 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	GPR4	P46093	362 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	GPR85	P60893	370 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	ARF3	P61204	181 aa	Predicted RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	IGLV3-21	P80748	117 aa	Predicted RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	FABP5	Q01469	135 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CD300C	Q08708	224 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	OR1Q1	Q15612	314 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	BAK1	Q16611	211 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	MRPL2	Q5T653	305 aa	Known RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	HBM	Q6B0K9	141 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	MZT2B	Q6NZ67	158 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	SMARCD3	Q6STE5	483 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	OLIG3	Q7RTU3	272 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	NRARP	Q7Z6K4	114 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CPO	Q8IVL8	374 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CA13	Q8N1Q1	262 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	LSMEM1	Q8N8F7	131 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	RELL2	Q8NC24	303 aa	Predicted RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	C7orf57	Q8NEG2	295 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	DUSP18	Q8NEJ0	188 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	ATP6V1C2	Q8NEY4	427 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	OR6F1	Q8NGZ6	308 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	LINC01560	Q8TB33	94 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TMEM255B	Q8WV15	326 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TMEM158	Q8WZ71	300 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	PHYHIP	Q92561	330 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	MRPL48	Q96GC5	212 aa	Known RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	ZNF486	Q96H40	463 aa	Predicted RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	SAMD8	Q96LT4	415 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	SECISBP2	Q96T21	854 aa	Known RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	ATF6B	Q99941	703 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TTYH2	Q9BSA4	534 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	DEFB127	Q9H1M4	99 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TMEM27	Q9HBJ8	222 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	HINT3	Q9NQE9	182 aa	Known RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	SACM1L	Q9NTJ5	587 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	RBFOX1	Q9NWB1	397 aa	Known RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	BEX4	Q9NWD9	120 aa	Predicted RBP	6.62	□□□□□ -1.35
NF1-222	ENST00000582892	C14orf119	Q9NWQ9	140 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	TEKT2	Q9UIF3	430 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	CARD8	Q9Y2G2	431 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	GPR52	Q9Y2T5	361 aa		6.62	□□□□□ -1.35
NF1-222	ENST00000582892	MED31	Q9Y3C7	131 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms