RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 UBAP1Q9NZ09 502 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 NUP50Q9UKX7 468 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 POM121CA8CG34 1229 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 DHHO43323 396 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 RNF13O43567 381 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 MFN2O95140 757 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 GCH1P30793 250 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF84P51523 738 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 CDH12P55289 794 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 VSNL1P62760 191 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 CDK6Q00534 326 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 HSF2Q03933 536 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 MIDNQ504T8 468 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF771Q7L3S4 317 aaPredicted RBP9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 RBM15BQ8NDT2 890 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 LRRC58Q96CX6 371 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 DUX5Q96PT3 197 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF607Q96SK3 696 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 PAIP1Q9H074 479 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 KCNK9Q9NPC2 374 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 CYSLTR2Q9NS75 346 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 THAP1Q9NVV9 213 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 PLEK2Q9NYT0 353 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 CGGBP1Q9UFW8 167 aaPredicted RBP9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
CTDNEP1-212ENST00000576613 VWFP04275 2813 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 A0A0G2JK05 382 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 UBDO15205 165 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 SPRY3O43610 288 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 MGRN1O60291 552 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF500O60304 480 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 TPST1O60507 370 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 SERPINB7O75635 380 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 UBOX5O94941 541 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 IGHV1-46P01743 117 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 IGHG1P01857 330 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 RNASE1P07998 156 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 QDPRP09417 244 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 PGA4P0DJD7 388 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 PGA3P0DJD8 388 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 KITP10721 976 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 MAKP20794 623 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 PPIBP23284 216 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 LIPAP38571 399 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 CLRN1P58418 232 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 BAMBIQ13145 260 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF718Q3SXZ3 478 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZMAT1Q5H9K5 638 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 HHATQ5VTY9 493 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 LRFN4Q6PJG9 635 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC2A7Q6PXP3 512 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 ARMC8Q8IUR7 673 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 SYT14Q8NB59 555 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 OR9I1Q8NGQ6 314 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 AENQ8WTP8 325 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 GTF3AQ92664 365 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 MAELQ96JY0 434 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 RSPO3Q9BXY4 272 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 KCNN2Q9H2S1 579 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 NANSQ9NR45 359 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 EIF3KQ9UBQ5 218 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 PURGQ9UJV8 347 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 AUP1Q9Y679 476 aa9.87□□□□□ -0.83
CTDNEP1-212ENST00000576613 CHP2O43745 196 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 FMO6PO60774 539 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 HIST1H2ABP04908 130 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 CCNOP22674 350 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC6A2P23975 617 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 MMP15P51511 669 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 MPP2Q14168 576 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 MELKQ14680 651 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF74Q16587 644 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 TUSC1Q2TAM9 212 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 HIST3H2AQ7L7L0 130 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 C1orf174Q8IYL3 243 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 LRRC18Q8N456 261 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 KLHL36Q8N4N3 616 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 SPICQ8N5J4 248 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 HIPK4Q8NE63 616 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 DEFB108BQ8NET1 73 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 IPCEF1Q8WWN9 437 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 HIST1H2ACQ93077 130 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 DIRC2Q96SL1 478 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 MRI1Q9BV20 369 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 C1QTNF5Q9BXJ0 243 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLITRK2Q9H156 845 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 CENPHQ9H3R5 247 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLCO1B3Q9NPD5 702 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 TAS2R5Q9NYW4 299 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF69Q9UC07 566 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 LEF1Q9UJU2 399 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZDHHC8Q9ULC8 765 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 TRIM33Q9UPN9 1127 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 CORO2BQ9UQ03 480 aa9.86□□□□□ -0.83
CTDNEP1-212ENST00000576613 CLDN34H7C241 214 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 TPST2O60704 377 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 SNNO75324 88 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms