RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 OR2M3Q8NG83 312 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 OR4D11Q8NGI4 311 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 SETD6Q8TBK2 473 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 DMRTB1Q96MA1 342 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ING4Q9UNL4 249 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 IGLV3-12A0A075B6K2 115 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 A0A096LPE4 126 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 A0A1W2PPZ6 126 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 PRSS37A4D1T9 235 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ZAR1LA6NP61 321 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ADH6P28332 368 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 NUP62P37198 522 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 CAPZA1P52907 286 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 INPP5JQ15735 1006 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 THEM4Q5T1C6 240 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 PEAR1Q5VY43 1037 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 DCXRQ7Z4W1 244 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 RNASE11Q8TAA1 199 aaKnown RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 SLC25A44Q96H78 314 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 GABARAPL1Q9H0R8 117 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 SYNPO2LQ9H987 977 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ACOT13Q9NPJ3 140 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ASH2LQ9UBL3 628 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 HHLA2Q9UM44 414 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 SIGLEC7Q9Y286 467 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 GMEB1Q9Y692 573 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 HTTP42858 3142 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 NCOR2Q9Y618 2525 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 FABP12A6NFH5 140 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 SPI1P17947 270 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 MSR1P21757 451 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 GZMMP51124 257 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 AGFG1P52594 562 aaKnown RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 CLN3Q13286 438 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 FDCSPQ8NFU4 85 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 LGALS12Q96DT0 336 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 MOGAT1Q96PD6 335 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ZNF223Q9UK11 482 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 NDRG4Q9ULP0 352 aaKnown RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 ZC3H12DA2A288 527 aaKnown RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 DHHO43323 396 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 SELENOFO60613 162 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 DHFRP00374 187 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 SFTPCP11686 197 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ADARB1P78563 741 aaKnown RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 PMP22Q01453 160 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 HNRNPA0Q13151 305 aaKnown RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 FAM189A2Q15884 450 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 C3AR1Q16581 482 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 SLC35D3Q5M8T2 416 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 FHL5Q5TD97 284 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 GTPBP8Q8N3Z3 284 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 ZSCAN4Q8NAM6 433 aaPredicted RBP9.11□□□□□ -0.95
SMG6-213ENST00000573166 FNDC9Q8TBE3 224 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 PLA2G12AQ9BZM1 189 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 ROS1P08922 2347 aa9.11□□□□□ -0.95
SMG6-213ENST00000573166 RGS9O75916 674 aaPredicted RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 ECDO95905 644 aaPredicted RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 UMODP07911 640 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 BMP5P22003 454 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 UQCRC1P31930 480 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 RPS27P42677 84 aaKnown RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 RAC3P60763 192 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 SNRPGP62308 76 aaKnown RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 TUBA1BP68363 451 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 TEKQ02763 1124 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 CEBPEQ15744 281 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 TUBA3EQ6PEY2 450 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 C19orf48Q6RUI8 117 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 TUBA1AQ71U36 451 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 LINGO2Q7L985 606 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 PEG10Q86TG7 708 aaKnown RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 FAM26EQ8N5C1 309 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 LSMEM1Q8N8F7 131 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 GINS4Q9BRT9 223 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 PSORS1C1Q9UIG5 152 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 KLK13Q9UKR3 277 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 STUB1Q9UNE7 303 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 PCNX1Q96RV3 2341 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 COL4A4P53420 1690 aaPredicted RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 SGCEO43556 437 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 WNT11O96014 354 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 IFI6P09912 130 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 EMX1Q04741 257 aaPredicted RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 CEACAM16Q2WEN9 425 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 OTPQ5XKR4 325 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 PXKQ7Z7A4 578 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 ATG4DQ86TL0 474 aaPredicted RBP9.1□□□□□ -0.95
SMG6-213ENST00000573166 ADGRG3Q86Y34 549 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 MINDY2Q8NBR6 621 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 OR1J2Q8NGS2 313 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 MNTQ99583 582 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 TUBA1CQ9BQE3 449 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 MED18Q9BUE0 208 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 TTTY12Q9BZ98 90 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 C12orf10Q9HB07 376 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 IL20Q9NYY1 176 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 PCP4L1A6NKN8 68 aa9.1□□□□□ -0.95
SMG6-213ENST00000573166 DOK2O60496 412 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms